Job Description P30140 Confidence 96.62% Date Thu Jan 5 11:46:06 GMT 2012 Rank 27 Aligned Residues 231 % Identity 15% Template c3e02A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849; PDBTitle: crystal structure of a duf849 family protein (bxe_c0271) from2 burkholderia xenovorans lb400 at 1.90 a resolution Resolution 1.90 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																											.	.	.	.																															.	.	.	.	.	.
Query SS confidence																											.	.	.	.																															.	.	.	.	.	.
Query Sequence		L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	.	.	.	.	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	.	.	.	.	.	.	Q	P	L	A	E	T	E	Y	A	E	L	K	Q	L	G
Query Conservation																											.	.	.	.																															.	.	.	.	.	.
Alig confidence																											.	.	.	.					.																						.				.	.	.	.	.	.
Template Conservation																																			.																						.
Template Sequence		I	T	P	E	E	I	V	K	E	G	V	A	A	A	E	A	G	A	A	X	L	H	L	H	A	R	D	P	L	N	G	R	P	.	S	Q	D	P	D	L	F	X	R	F	L	P	Q	L	K	E	R	T	D	A	I	.	L	N	I	T	T	G	G	G	L	G	X	S	L	D	E	R	L	A	P	A	R	A	A	R
Template Known Secondary structure			S															T		S									T	T	T				.								T	T	T												.					S	S		S	T	T
Template Predicted Secondary structure																																			.																						.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.																							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	G	V	M	V	Y	Q	E	T	Y	H	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																		.					.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.																		.					.	.	.	.	.	.	.
Template Sequence		P	E	V	A	S	X	N	X	G	S	L	N	F	N	I	S	Q	A	A	A	K	F	D	T	F	K	F	D	W	E	R	P	Y	L	A	G	T	R	D	F	I	L	S	N	.	.	.	.	T	F	S	Q	I	E	R	G	X	T	E	L	G	A	S	G	T	.	R	F	E	F	.	.	.	.	.	.	.	E	C	Y
Template Known Secondary structure			S							S					B		G	G	G	G	G	G		S			S	S	T	T								G	G	G						.	.	.	.														T	T	T		.					.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.																		.					.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170								.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	S	Y	M	V	A	E	H	L	L	W	L	Q	Q	H	Y	W	Q	S	R	Y	S	V	S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	E	I	E	L	S	L	S	T	R	E	S	P	W	F	R	D	R	V	I	P
Query Conservation
Alig confidence			.	.	.														.																			.	.	.	.
Template Conservation			.	.	.														.																			.	.	.	.
Template Sequence		D	.	.	.	V	G	H	L	Y	N	L	A	H	F	V	D	R	.	K	L	V	E	P	P	F	F	L	Q	C	V	F	G	I	L	G	G	.	.	.	.	I	G	A	D	P	E	N	L	L	H	X	R	T	I	A	D	R	L	F	G	Q	D	Y	Y	L	S	V	L	A	A	G	R	H	Q	X	P	F	V	T	X
Template Known Secondary structure		S	.	.	.													T	.	T	S	S		S											B	T	S	.	.	.	.			S																	T	T	S									G	G	G
Template Predicted Secondary structure			.	.	.														.																			.	.	.	.
Template SS confidence
		174				.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	N	N	V	S	A	F	S	K	T	Q	P	G	G	Y	A	D	N	H	P	E	L	E	Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	G	L	Q	P
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		S	.	.	.	.	A	I	L	G	G	N	V	R	V	G	L	E	D	S	L	Y	S	G	K	G	Q	L	A	T	S	N	A	E	Q	V	R	K	I	R	R	I	I	E	E	L	S	L	D	I
Template Known Secondary structure			.	.	.	.			T	T						S	T	T	T		S				T	T				S																T	T			B
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		246					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions