Job Description P30140 Confidence 97.17% Date Thu Jan 5 11:46:06 GMT 2012 Rank 21 Aligned Residues 229 % Identity 9% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																																	.	.	.	.
Query SS confidence																											.	.	.																																	.	.	.	.
Query Sequence		L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	.	.	.	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	Q	P	.	.	.	.	L	A	E	T	E	Y	A	E	L	K	Q	L	G	L	D	G
Query Conservation																											.	.	.																																	.	.	.	.
Alig confidence																											.	.	.					.																												.	.	.	.
Template Conservation																																		.
Template Sequence		I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	.	S	S	D	P	D	R	F	A	R	L	T	E	G	L	H	T	H	C	P	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R	G	G	X	L	P	L	K	P	D	X
Template Known Secondary structure			S															T											T	T	S			.																		S	T	T									T	T	T			G	G	G	G	G	T	T	G	G	G			S
Template Predicted Secondary structure																																		.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	V	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W	R	V	D	S	Y	M	V	A	E	H	L	L	W	L	Q	Q	H	Y	W	Q	S	R	Y	S	V
Query Conservation
Alig confidence																		.	.	.	.	.	.																			.					.	.	.	.	.	.	.					.	.	.														.
Template Conservation																		.	.	.	.	.	.																			.					.	.	.	.	.	.	.					.	.	.														.
Template Sequence		A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	.	.	.	.	.	.	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	.	T	P	E	I	.	.	.	.	.	.	.	E	A	F	D	.	.	.	L	S	H	I	L	R	A	I	D	X	H	G	R	.	G	L	L	Y	G	K	L
Template Known Secondary structure							S					S	S	S				.	.	.	.	.	.																	T		.					.	.	.	.	.	.	.			S	S	.	.	.													T	.	T		S		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.																			.					.	.	.	.	.	.	.					.	.	.														.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.								.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	E	I	E	L	S	L	S	T	R	E	S	P	W	F	R	D	R	V	I	P	L	A	I	N	N	V	S	A	F	S	K	T	Q	P	G	G	Y	A	D	N	H	P	E	L	E
Query Conservation
Alig confidence													.	.	.	.																													.	.	.	.	.
Template Conservation													.	.	.	.																													.	.	.	.	.
Template Sequence		Y	V	Q	F	V	X	G	V	K	N	A	.	.	.	.	X	P	A	D	R	E	V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	.	.	.	.	.	I	G	A	N	Q	L	T	V	N	E	W	A	I	A	A	G	G	H	T	R	T	G	L	E	D	N	I	R	L	D	R	Q
Template Known Secondary structure										T	T	S	.	.	.	.																				T	T	S							.	.	.	.	.		T	T												T	T						S	T	T	T			B	S	S	S	S
Template Predicted Secondary structure													.	.	.	.																													.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	G	L	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	A	P	S	N	A	A	L	V	R	R	S	V	E	L	C	D	K	Y	Q	R	P	V
Template Known Secondary structure			B																		T	T			B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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