Job Description P30140 Confidence 70.45% Date Thu Jan 5 11:46:06 GMT 2012 Rank 156 Aligned Residues 80 % Identity 18% Template c2yxgD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.
Predicted Secondary structure																											.	.																									.	.	.														.	.	.	.
Query SS confidence																											.	.																									.	.	.														.	.	.	.
Query Sequence		L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	.	.	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	.	.	.	S	L	Q	M	E	V	Q	P	L	A	E	T	E	.	.	.	.	Y	A	E	L	K	Q	L	G	L
Query Conservation																											.	.																									.	.	.														.	.	.	.
Alig confidence																											.	.					.																				.	.	.														.	.	.	.
Template Conservation																																	.
Template Sequence		V	D	F	D	G	L	E	E	N	I	N	F	L	I	E	N	G	V	S	G	I	V	A	V	G	T	T	G	E	S	P	.	T	L	S	H	E	E	H	K	K	V	I	E	K	V	V	D	V	V	N	G	R	V	Q	V	I	A	G	A	G	S	N	C	T	E	E	A	I	E	L	S	V	F	A	E	D	V	G	A
Template Known Secondary structure																	T	T		S					S	S	T	T	T	T	G	G	.	G	S																	T	T	S	S									S	S															T
Template Predicted Secondary structure																																	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	M	V	Y	Q	E	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	L	S	I	T	P	Y	Y
Template Known Secondary structure		S									S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions