Job Description P30140 Confidence 91.97% Date Thu Jan 5 11:46:06 GMT 2012 Rank 75 Aligned Residues 225 % Identity 15% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																									.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence												.																																									.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		C	G	F	S	M	S	N	R	I	K	.	R	K	T	L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E	H	Q	A	K	V	G	M	D	Y	F	.	.	.	.	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	.	.	.	.	.	.	.
Query Conservation												.																																									.	.	.	.																			.	.	.	.	.	.	.
Alig confidence												.																																	.								.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		V	V	L	R	D	A	H	Q	S	L	F	A	T	R	L	R	I	D	D	M	L	P	I	A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	.	D	S	C	I	R	F	L	G	E	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L
Template Known Secondary structure			T	T	T							S	T	T								T	T	T						T	S			S							T	T			.							T																T	T	S								G	G	G	T
Template Predicted Secondary structure																																													.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	Q	P	L	A	E	T	E	Y	A	E	L	K	Q	L	G	L	D	G	V	M	V	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	I	G	L	S	D	N	W
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	Y	R	H	Y	A	D	D	V	V	D	T	F	V	E	R	A	V	K	N	G	M	D	V	F	R	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	M	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N
Template Known Secondary structure		T	S	S	S																		T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																	T													T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		R	V	D	S	Y	M	V	A	E	H	L	L	W	L	Q	Q	H	Y	W	Q	S	R	Y	S	V	S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	E	I	E	L	S	L	S	.	.	.	.	T	R	E	S	P	W	F	R	D
Query Conservation																																																																					.	.	.	.
Alig confidence																.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																							.									.	.	.	.
Template Conservation																.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																							.
Template Sequence		L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	.	.	.	.	.	.	G	V	D	S	I	A	L	.	.	.	.	.	.	.	.	.	K	D	M	A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	.	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L
Template Known Secondary structure															T	.	.	.	.	.	.	T		S					.	.	.	.	.	.	.	.	.			S	S	S																		.	S		S									T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	P	L	A	I	N	N	V	S	A	F	S	K	T	Q	P	G	G	Y	A	D	N	H	P	E	L	E	Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	G	L	Q	P
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	I	E	A	G	V	D	R	V	D	T	A	I	S	S	M	S	G	T	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	A	T	E	S	L	V	A	T	L	Q	G	T	G	Y	D	T
Template Known Secondary structure						T	T		S					B		G	G	G		S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.			B									T	T	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.														.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions