Job Description P30140 Confidence 76.30% Date Thu Jan 5 11:46:06 GMT 2012 Rank 137 Aligned Residues 127 % Identity 11% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		L	E	Q	L	A	Q	R	A	Q	R	L	T	R	Q	R	F	G	N	T	V	S	F	Y	V	P	L	Y	L	S	N	L	C	A	N	D	.	.	C	T	Y	C	G	F	S	M	S	N	R	I	K	R	K	T	L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T
Template Known Secondary structure																	T	T	S																										T	T							T	T																T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		132	.																			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	.	S	L	Q	M	E	V	Q	P	L	A	E	T	E	Y	A	E	L	K	Q	L	G	L	D	G	V	M	V	Y
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																			.
Template Conservation																																																													.
Template Sequence		S	T	R	K	R	I	K	L	I	C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G	V	S	K	K	E	H	A	R	E	I	G	.	S	F	A	D	G	V	V	V	G
Template Known Secondary structure															S	S						S	S																			S						S	S			S									.	T	T	S	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions