Job Description P30140 Confidence 98.22% Date Thu Jan 5 11:46:06 GMT 2012 Rank 14 Aligned Residues 253 % Identity 9% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	F	S	M	S	N	R	I	K	R	K	T	L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	Q	P	L	A	E	T	E	Y	A	E	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	P	R	D	G	L	Q	N	E	P	V	W	I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	P	N	Q	R	G	L	E	N	A	L
Template Known Secondary structure							T	G	G	G	S	S	S																T	T	T		S								S		T	T	T		G	G	G	T	T								S				T	T									S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Q	L	G	L	D	G	V	M	V	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H	H	L	K	G	K	K	Q	D	F	F	W	R	L	E	T	P	D	R	L	G	R	A	G	I	D	K	I	G	L	G	A	L	.	.	I	G	L	S	D	N	W	R	V	D	S	Y	M	V	A	E	H	L	L	W	L	Q	Q	H
Query Conservation																																																								.	.
Alig confidence															.																																	.								.	.
Template Conservation															.																																	.
Template Sequence		E	G	G	I	N	E	A	C	V	F	X	S	A	.	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	.	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F
Template Known Secondary structure				T		S								S	.	S						T	T	T		S																			T	T		.									T	T		B	T	T	T	B
Template Predicted Secondary structure															.																																	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	Q	S	R	Y	S	V	S	F	P	R	L	R	P	C	T	G	G	I	E	P	A	S	I	M	D	E	R	Q	L	V	Q	T	I	C	A	F	R	L	L	A	P	E	I	E	L	S	L	S	T	R	E	S	P	W	F	R	D	R	V	I	P	L	A	I	N	N	V	S	A	F	S	K	T	Q	P	G	G	Y
Query Conservation
Alig confidence		.	.	.								.	.	.	.	.	.	.	.	.																																															.	.	.
Template Conservation		.	.	.								.	.	.	.	.	.	.	.	.																																															.	.	.
Template Sequence		.	.	.	G	I	S	E	L	S	L	.	.	.	.	.	.	.	.	.	G	D	T	I	G	A	A	N	P	A	Q	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	Q	I	A	L	H	F	H	D	T	R	G	T	A	L	A	N	X	V	T	A	.	.	.	L	Q	X	G	I	T	V	F	D	G	S	A
Template Known Secondary structure		.	.	.	T		S					.	.	.	.	.	.	.	.	.			S	S																	T	T	S		G	G	G						B	G	G	G	S										.	.	.				T							B	G
Template Predicted Secondary structure		.	.	.								.	.	.	.	.	.	.	.	.																																															.	.	.
Template SS confidence
					170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	N	H	P	E	L	E	Q	F	S	P	H	D	D	R	R	P	E	A	V	A	A	A	L	T	A	Q	G	L	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	L	G	G	C	P	Y	A	P	G	S	S	G	N	A	A	T	E	D	I	V	Y	X	L	E	Q	X	D	I	K	T
Template Known Secondary structure		G	G					T	T							B		B											T	T		B
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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