Job Description P30140 Confidence 86.16% Date Thu Jan 5 11:46:06 GMT 2012 Rank 101 Aligned Residues 89 % Identity 7% Template c1djnB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1) Resolution 2.20 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																																	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																																	.
Query Sequence		L	D	E	A	D	I	A	R	E	S	A	A	I	R	E	M	G	F	E	H	L	L	L	V	T	G	.	.	.	.	.	.	.	.	.	E	H	Q	A	K	V	G	M	D	Y	F	R	R	H	L	P	A	L	R	E	Q	F	S	S	L	Q	M	E	V	Q	P	L	.	A	E	T	E	Y	A	E	L	K	Q	L	G
Query Conservation																												.	.	.	.	.	.	.	.	.																																	.
Alig confidence																												.	.	.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		I	E	A	E	V	D	G	Q	K	F	V	E	M	A	D	S	L	V	D	M	W	D	I	T	I	G	D	I	A	E	W	G	E	D	A	G	P	S	R	F	Y	Q	Q	G	H	T	I	P	W	V	K	L	V	K	Q	V	S	K	K	P	V	L	G	V	G	R	Y	T	D	P	E	K	M	I	E	I	V	T	K	G
Template Known Secondary structure				T	T	T										T	T	T		S							S		S	T	T	G	G	G	T	S			T	T	T			T	T	T	T									T	T		S	S						S														T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
			175	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.							.
Query SS confidence		.							.
Query Sequence		.	L	D	G	V	M	V	.	Y	Q	E	T	Y	H	E	A	T	Y	A	R	H
Query Conservation		.							.
Alig confidence		.							.
Template Conservation
Template Sequence		Y	A	D	I	I	G	C	A	R	P	S	I	A	D	P	F	L	P	Q	K	V
Template Known Secondary structure		S		S	B				S							T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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