Job Description P0AFZ3 Confidence 5.31% Date Thu Jan 5 11:27:39 GMT 2012 Rank 97 Aligned Residues 52 % Identity 8% Template c2w27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ykui protein; PDBTitle: crystal structure of the bacillus subtilis ykui protein,2 with an eal domain, in complex with substrate c-di-gmp and3 calcium Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		P	R	R	P	Y	L	L	R	A	F	Y	E	W	L	L	D	N	.	.	.	Q	L	T	P	H	L	V	V	D	V	T	L	P	G	V	Q	V	P	M	E	Y	A	R	D	G	Q	I	V	L	N	I	A	P	R	A
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		S	W	R	P	Y	F	L	E	N	I	M	R	M	R	N	L	R	K	G	F	F	S	D	L	Y	S	D	L	E	T	G	E	M	I	R	T	F	S	Y	P	M	D	D	Q	M	Y	L	F	I	D	L	P	Y	S	Y
Template Known Secondary structure		T	T	S	T	T													S										T	T	T		S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions