Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFZ3
Confidence12.38%DateThu Jan 5 11:27:39 GMT 2012
Rank32Aligned Residues16
% Identity13%Templatec2kkpA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171).
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20........
Predicted Secondary structure 




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Query Sequence  LLRAFYEWLLDNQLTP
Query Conservation 



 
 
  

  

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Template Conservation   
  

  

    
 
Template Sequence  VLHEAMSQARESGLLL
Template Known Secondary structure  TTTS
S
Template Predicted Secondary structure 




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   81........90......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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