Return to main results Retrieve Phyre Job Id

Job DescriptionP37340
Confidence5.96%DateThu Jan 5 11:55:21 GMT 2012
Rank22Aligned Residues92
% Identity13%Templated1pf4a2
SCOP infoABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRR
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Template Sequence  KRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWVS
Template Known Secondary structure  TTS
SSTTSS
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TTTG
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   82.......90...
Predicted Secondary structure 
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Query Sequence  ERIAHQVRQGFW
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Template Conservation        

    
Template Sequence  GNVVMQMRRRLF
Template Known Secondary structure  GG
Template Predicted Secondary structure 
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   94.....100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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