Job Description P32668 Confidence 94.16% Date Thu Jan 5 11:49:57 GMT 2012 Rank 6 Aligned Residues 120 % Identity 18% Template c3i86A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium subspecies2 paratuberculosis antigen map1204 Resolution 2.40 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		L	A	I	A	D	G	A	R	Q	Q	I	G	S	T	L	F	Y	D	P	A	Y	V	Q	L	T	Y	P	G	G	D	V	P	Q	E	R	G	.	.	.	.	V	C	S	D	V	V	I	R	A	L	R	S	Q	K	V	D	L	Q	K	L	V	H	E	D	M	A	K	N	F	A	E	Y	P	Q	K	W	K	L	K	R
Query Conservation																																						.	.	.	.
Alig confidence														.	.																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	V	I	K	R	M	G	S	Q	M	G	.	.	V	P	Y	S	W	G	G	G	S	L	D	G	P	S	K	G	V	G	D	G	A	N	I	T	G	F	D	C	S	G	L	M	R	Y	G	F	A	G	V	G	V	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	T	.	.		B	B		T	T				S	S	S					S	G	G	G	G	G				B												T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	S	N	I	D	H	R	R	V	P	N	L	E	T	W	F	S	R	H	D	K	T	R	P	T	S	K	N	P	S	D	Y	Q	A	G	D	I	V	S	W	R	L	D	N	G	L	A	H	I	G	V	V	S	D	G	F	A	R	D	G	T	P	L	V	I	H	N	I	G	A	G	A	Q	E	E	D	V	L	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.													.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.													.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	P	R	F	S	G	D	Q	Y	N	A	G	R	H	I	P	Q	D	Q	.	.	.	.	A	R	R	G	D	L	I	F	Y	G	.	P	G	G	S	Q	H	V	T	M	Y	L	G	.	.	.	.	N	G	Q	M	L	E	A	S	G	S	A	G	K	V	T	V	S	P	.	V	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		S	S					T	T	S	S					G	G	G	.	.	.	.			T	T						S	.	G	G	G		S								.	.	.	.	T	T								T	T	T							.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.													.	.	.	.																			.
Template SS confidence
												171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230
		193	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	R	M	V	G	H	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	G	M	T	P	F	L	T
Template Known Secondary structure			T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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