Job Description P32668 Confidence 95.02% Date Thu Jan 5 11:49:57 GMT 2012 Rank 4 Aligned Residues 112 % Identity 15% Template c3gt2A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c Resolution 1.75 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.												70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.				.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.				.
Query Sequence		L	A	I	A	D	G	A	R	Q	Q	I	G	S	T	L	F	Y	D	P	A	Y	V	Q	L	T	Y	P	G	G	D	V	P	Q	.	.	.	.	.	.	.	.	.	.	.	E	R	G	.	V	C	S	D	V	V	I	R	A	L	R	S	Q	K	V	D	L	Q	K	L	V	H	E	D	M	A	K	N	F	A	E	Y
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.				.
Alig confidence																			.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.				.																										.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		D	V	V	I	A	R	G	L	S	Q	R	G	V	P	F	S	W	.	.	.	.	.	.	.	.	.	.	A	G	G	G	I	N	G	P	T	R	G	T	G	T	G	A	N	T	V	G	F	D	A	S	G	L	X	Q	Y	A	Y	A	G	A	G	I	K	L	P	R	S	S	G	A	X	Y	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	T		B	B		T	.	.	.	.	.	.	.	.	.	.	T			B	T	T	B					S	G	G	G	T	T				B												T	T	T					S	S					T	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	K	W	K	L	K	R	P	D	S	N	I	D	H	R	R	V	P	N	L	E	T	W	F	S	R	H	D	K	T	R	P	T	S	K	N	P	S	D	Y	Q	A	G	D	I	V	S	W	R	L	D	N	G	L	A	H	I	G	V	V	S	D	G	F	A	R	D	G	T	P	L	V	I	H	N	I	G	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.												.	.	.	.	.	.									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.												.	.	.	.	.	.									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	G	Q	K	I	L	P	Q	Q	A	R	K	G	D	L	I	F	Y	G	.	P	E	G	T	Q	S	V	A	X	Y	L	.	.	.	.	.	.	G	N	N	Q	X	L	E	V	.	G	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S					G	G	G			T	T						S	.	G	G	G		S							.	.	.	.	.	.		T	T						.	S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.												.	.	.	.	.	.									.
Template SS confidence
																																143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.		.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	E	D	V	L	F	N	W	R	M	V	G	H	Y	R	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	V	S	P	V	R	T	A	G	X	A	P	Y	X	V	R	V	L
Template Known Secondary structure										T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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