Job Description P76308 Confidence 26.63% Date Wed Jan 25 15:21:07 GMT 2012 Rank 4 Aligned Residues 64 % Identity 9% Template c2jopA_ PDB info PDB header:immune system Chain: A: PDB Molecule:t-cell surface glycoprotein cd5; PDBTitle: solution structure of the n-terminal extracellular domain2 of the lymphocyte receptor cd5 (cd5 domain 1) Resolution UNK

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		V	S	E	V	D	A	A	T	G	I	V	R	L	V	Y	D	Q	A	F	L	Q	H	A	H	T	D	R	Y	V	.	.	.	.	.	.	S	R	G	I	A	D	R	A	C	Q	Q	E	G	Y	T	H	A	V	P	F	G	Q	P	V	G	N	C	S	L	F	A	G	S	L	C
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	S	N	S	K	C	Q	G	Q	L	E	V	Y	L	K	D	G	W	H	M	V	C	S	Q	S	W	G	R	S	S	K	Q	W	E	D	P	S	Q	A	S	K	V	C	Q	R	L	N	C	G	D	P	L	S	L	G	P	F	L	K	T	Y	T	P	Q	S	S	I	I	C
Template Known Secondary structure			S	S	S	B	T	T	B	B	S						T	T							S	S	T	B	T				S	S		S				S								T	T	S	S	S								S	S		S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions