Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED0
Confidence75.03%DateThu Jan 5 11:23:03 GMT 2012
Rank20Aligned Residues94
% Identity23%Templatec3a2kB_
PDB info PDB header:ligase/rnaChain: B: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils complexed with trna
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  KHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITE
Query Conservation 
 


 

 
  
  

  
  

      
 
  
                                            
Alig confidence 









































...............






















Template Conservation    



 


 

  

 

            








 ...............  
      
        
    
Template Sequence  AAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRG. . . . . . . . . . . . . . . RESEEEMEFVKRFCVERRILCET
Template Known Secondary structure  SB

SSTTT
B

TT
T...............TT
Template Predicted Secondary structure 














...............




Template SS confidence 















































































   1920.........30.........40.........50.........60 .........70.........80...
 
   84.....90.. .......100.........110..
Predicted Secondary structure 


................




Query SS confidence 








. . . . . . . . . . . . . . . .



















Query Sequence  TLSGSGDLG. . . . . . . . . . . . . . . . QVLVDAIKKYDMDLVVCGHH
Query Conservation           ................  
          

  
  
Alig confidence 








................



















Template Conservation                  
  

  

  
   
       
  


Template Sequence  AQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHH
Template Known Secondary structure 

TTTTT

STTT





Template Predicted Secondary structure 









Template SS confidence 












































   84.....90.........100.........110.........120........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions