Job Description P0AED0 Confidence 39.04% Date Thu Jan 5 11:23:03 GMT 2012 Rank 35 Aligned Residues 98 % Identity 27% Template c1o94D_ PDB info PDB header:electron transport Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein Resolution 2.0 Å

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		5	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		H	I	L	I	A	V	D	.	.	.	.	.	L	S	P	E	S	K	V	L	V	E	K	A	V	S	M	A	R	P	Y	N	A	K	V	S	L	I	H	V	D	V	N	Y	S	D	L	Y	T	G	L	I	D	V	N	L	G	D	M	Q	K	R	I	S	E	E	T	H	H	A	L	T	E	L	S	T	N	A	G	Y
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	V	I	A	E	H	R	R	N	D	L	R	P	V	S	L	E	L	I	G	A	A	N	G	L	K	K	S	G	E	D	K	V	V	V	A	V	I	G	S	Q	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	V	P	A	L	S	V	N	G	V
Template Known Secondary structure											T	T				T											T	T		S	S	T	T									S	T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G						B	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																									.	.	.	50	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		P	I	T	E	T	L	S	G	S	G	D	.	.	.	.	.	.	L	G	Q	V	L	V	D	A	I	K	K	Y	D	M	D	L	V	V	C	G	H	H	Q	D	F	W	S	K	L	M	S	S	A	R	Q	L
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	L	V	V	V	K	G	S	S	I	D	F	D	P	D	V	F	E	A	S	V	S	A	L	I	A	A	H	N	P	S	V	V	L	L	P	H	S	V	D	S	L	G	Y	A	S	S	L	A	S	K	T
Template Known Secondary structure		S								S		S	S																				S							S					T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions