Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADV5
Confidence100.00%DateThu Jan 5 11:21:55 GMT 2012
Rank8Aligned Residues317
% Identity19%Templatec3sdoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:nitrilotriacetate monooxygenase; PDBTitle: structure of a nitrilotriacetate monooxygenase from burkholderia2 pseudomallei
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.... .....20.........30.........40.........50......... 60......
Predicted Secondary structure 




..........























......
Query SS confidence 











. . . . . . . . . .












































. . . . . .






Query Sequence  DKTIAFSLLDLA. . . . . . . . . . PIPEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAA. . . . . . TSVLIGY
Query Conservation          
   ..........                
 
  

  


  
  


         ......
   

 
Alig confidence 











..........
.










































......






Template Conservation     
  
 

         
  
.               

  

  


 

  

               

   

 
Template Sequence  RKHIHFGVLIQGAGANMNAWKHP. SVPPDASVNFDFYVDRARRAENAGIAFAFIADSAYVTPKSAPHFLNRFEPISLLSA
Template Known Secondary structure 





TT
SSTTGGGST.TS
TTGGG
TT








TTS
S


Template Predicted Secondary structure 














.






























Template SS confidence 















































































   3......10.........20..... ....30.........40.........50.........60.........70.........80.
 
   67..70.........80.........90.........100.........110.........120........ .130.........140...
Predicted Secondary structure 























...
Query SS confidence 





























































. . .














Query Sequence  LAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHM. . . SGDIDNFPRDVAELV
Query Conservation 

  
 

 


 
       
  

   



 

 

  



 
 
             ...        
 
  
 
Alig confidence 














.





























..













...














Template Conservation 


 
 





 
 .     
  

   



 

 

  



 ..
    
    
        
     
 
  

Template Sequence  LAVLTSKIGLVGTMS. SSYSEPYNVARQFASLDLISGGRAGWNVVT. . SSIEGTGKNYGRPHPDHAQRYAIAAEHLDVVQ
Template Known Secondary structure  TT
SS
.SSSS
TTS
S..S

TTGGGGTT
SS

STT
Template Predicted Secondary structure 





.









..









Template SS confidence 















































































   82.......90...... ...100.........110.........120...... ...130.........140.........150........
 
   144.....150 .........160.........170.........180.........190...
Predicted Secondary structure 



..............................






















Query SS confidence 






. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .










































Query Sequence  DWFDARD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PNPHVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHF
Query Conservation         ..............................        
      

  
  

     

  


       
Alig confidence 






..............................










































Template Conservation   

                         
   
           
      


  
  
      

   
        
Template Sequence  GLWDSWDDDALVRDRATGRFFDPDKLHRLDHRGRFFSVEGPLNIRRSPQGQPVIFQAGSSDDGIDLAGRSADAVFSNGST
Template Known Secondary structure  TSB
TT



BTTTTB


GGGB




SS




SS

BTTBS



S
S

SS
Template Predicted Secondary structure 



















































Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230........
 
   194.....200.........210.........220.........230.........240.........250.........260.........270...
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  APDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQ
Query Conservation                                    
    
 
                                      
Alig confidence 




















































.....





















Template Conservation             
      

              
  
   
           .....                      
Template Sequence  FDEARVFYRRVKAAAAAAGRNPDHVKVFPGIGPIVGATQQEADDKYRQVRDLL. . . . . SPREALAYLSHFFQQHDFSVLR
Template Known Secondary structure  TTS
GGGS


SSTTS.....
TTT

TT

Template Predicted Secondary structure 











.....





Template SS confidence 















































































   239240.........250.........260.........270.........280.........290. ........300.........310...
 
   274.....280.........290.........300.........310.........320....... ..330...
Predicted Secondary structure 













.
Query SS confidence 





















































.





Query Sequence  YGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAM. DVKEEL
Query Conservation            







   
       
 
   
       
    
  
 
.
    
Alig confidence 









































.....






.





Template Conservation            





 


 
    

 


   
      .....  
      


 
Template Sequence  EVAYEGTSEAFIGTPEAVASEMIRWVDEGAADGFMLGLPVTG. . . . . FGLDDFVDHVLPVL
Template Known Secondary structure 


TTTT
TTS
S

SSTT.....T
Template Predicted Secondary structure 














.....
Template SS confidence 




























































   349350.........360.........370.........380.........390 .........400....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions