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Job DescriptionP0ADV5
Confidence100.00%DateThu Jan 5 11:21:55 GMT 2012
Rank16Aligned Residues324
% Identity17%Templatec3b9nB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:alkane monoxygenase; PDBTitle: crystal structure of long-chain alkane monooxygenase (lada)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10...... ...20.........30.........40.........50... .
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Query Sequence  MTDKTIAFSLLDLAPI. . . . . . . . . . . PEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMT. . . . . . . . . . . . . . . G
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Template Sequence  MTKK. IHINAFEMNCVGHIAHGLWRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQ
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SBSBSSSTTGGGSTT

GGGTT
TT
S

SS



GGGSSTTBS
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   1... .....10.........20.........30.........40.........50.........60.........70.........
 
   55....60.........70.........80.........90.........100.........110.........120..... ....130
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Query Sequence  IASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALR. . . . RHMSG
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Template Sequence  IPVNDPLMLISAMAYVTKHLAFAVTFST. TYEHPYGHARRMSTLDHLTKGRIAWNVVT. . SHLPSADKNFGIKKILEHDE
Template Known Secondary structure 
SB

SGGG
SS
S.SSS
TTS

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   80.........90.........100....... ..110.........120.........130...... ...140.........150......
 
   131........140........ .150........ .160.........170.........
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Query Sequence  DIDNFPRDVAELVDWFDA. . . . . . . . . . . . . . . . . . . . . . RDPNPHVRPV. . . . . . . . . PGYGEKIPVWLLGSSLYSAQL
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Template Sequence  RYDLADEYLEVCYKLWEGSWEDNAVIRDIENNIYTDPSKVHEINHSGKYFEVPGPHLCEPSPQRTPVIYQAGMSERGREF
Template Known Secondary structure  TSB
TT
TTTT
GGGB




SS




SS


TTSS



S
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   180.........190.........200.........210.........220.........230.........240... .....
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Query Sequence  AAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQ. . . . . . . . . . . QAFVK
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Template Sequence  AAKHAECVFLGGKDVETLKFFVDDIRKRAKKYGRNPDHIKMFAGICVIVGKTHDEAMEKLNSFQKYWSLEGHLAHYGGGT
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S

BSSTGGGT

GGG

SSTT

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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   249250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  LRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAM.
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Template Sequence  GYDLSKYSSNDYIGSISVGEIINNMSKLDGKWFKLSVGTPKKVADEMQYLVEEAGIDGFNLVQYVSP. . . . . GTFVDFIE
Template Known Secondary structure 


TTSS
TT
BSSSSBTSGGGSSBS



SSTT.....
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   317..320.........330.........340.........350.........360.........370.........380... ......390.
 
   328.330...
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Query Sequence  DVKEEL
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Template Sequence  LVVPEL
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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