Job Description P0ABI4 Confidence 12.92% Date Thu Jan 5 11:15:33 GMT 2012 Rank 36 Aligned Residues 51 % Identity 14% Template c2fz0A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:v-snare component of the vacuolar snare complex PDBTitle: identification of yeast r-snare nyv1p as a novel longin2 domain protein Resolution UNK

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	L	F	T	L	R	E	R	E	L	P	A	F	R	L	Y	R	M	R	A	R	S	Q	S	M	V	D	G	N	A	Y	E	L	L	L	D	L	F	E	T	K	I	E	Q	L	A	D	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	V	Y	V	C	F	T	L	V	D	I	P	K	I	L	P	I	R	I	L	S	G	L	Q	E	Y	E	S	N	A	T	N	E	L	L	S	S	H	V	G	Q	I	L	D	S	F	H	E	E	L
Template Known Secondary structure		T									T	T	S		S	S										T	T	S	S				S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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