Job Description P0ABI4 Confidence 100.00% Date Thu Jan 5 11:15:33 GMT 2012 Rank 1 Aligned Residues 302 % Identity 17% Template c2bbjB_ PDB info PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter Resolution 3.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.														.
Query SS confidence																										.	.	.	.	.	.														.
Query Sequence		L	S	A	F	Q	L	E	N	N	R	L	T	R	L	E	V	E	E	S	Q	P	L	V	N	.	.	.	.	.	.	A	V	W	I	D	L	V	E	P	D	D	D	E	.	R	L	R	V	Q	S	E	L	G	Q	S	L	A	T	R	P	E	L	E	D	I	E	A	S	A	R	F	F	E	D	D	D	G	L	H	I
Query Conservation																										.	.	.	.	.	.														.
Alig confidence																										.	.	.	.	.	.														.
Template Conservation
Template Sequence		I	E	V	M	N	Y	S	I	E	E	F	R	E	F	K	T	T	D	V	E	S	V	L	P	F	R	D	S	S	T	P	T	W	I	N	I	T	G	I	H	R	T	D	V	V	Q	R	V	G	E	F	F	G	I	H	P	L	V	L	E	D	I	L	N	V	H	Q	R	P	K	V	E	F	F	E	N	Y	V	F	I
Template Known Secondary structure									S	S								S		S	T	T	T	G	G	G	G	G		S	S									T	T													T												T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		75	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure							.																																															.	.
Query SS confidence							.																																															.	.
Query Sequence		H	S	F	F	F	.	F	E	D	A	E	D	H	A	G	N	S	T	V	A	F	T	I	R	D	G	R	L	F	T	L	R	E	R	E	L	P	A	F	R	L	Y	R	M	R	A	R	S	Q	S	M	V	.	.	D	G	N	A	Y	E	L	L	L	D	L	F	E	T	K	I	E	Q	L	A	D	E	I	E	N	I
Query Conservation							.																																															.	.
Alig confidence							.																																															.	.
Template Conservation
Template Sequence		V	L	K	M	F	T	Y	D	K	N	L	H	E	L	E	S	E	Q	V	S	L	I	L	T	K	N	C	V	L	M	F	Q	E	K	I	G	D	V	F	D	P	V	R	E	R	I	R	Y	N	R	G	I	I	R	K	K	R	A	D	Y	L	L	Y	S	L	I	D	A	L	V	D	D	Y	F	V	L	L	E	K	I
Template Known Secondary structure										S	S	S														T	T							S	S	S			S										T	T		T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Y	S	D	L	E	Q	L	S	R	V	I	M	E	G	H	Q	G	D	E	Y	D	E	A	L	S	T	L	A	E	L	E	D	I	G	W	K	V	R	L	C	L	M	D	T	Q	R	A	L	N	F	L	V	R	K	.	.	A	R	L	P	G	G	Q	L	E	Q	A	R	E	I	L	R	D	I	E	S	L	L	P	H
Query Conservation																																																								.	.
Alig confidence																					.	.	.	.																																.	.
Template Conservation																					.	.	.	.
Template Sequence		D	D	E	I	D	V	L	E	E	E	V	L	E	R	P	E	K	E	T	.	.	.	.	V	Q	R	T	H	Q	L	K	R	N	L	V	E	L	R	K	T	I	W	P	L	R	E	V	L	S	S	L	Y	R	D	V	P	P	L	I	E	K	E	T	V	P	Y	F	R	D	V	Y	D	H	T	I	Q	I	A	D	T
Template Known Secondary structure											T	T	T	S	S		S	S			.	.	.	.																															S		T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	S	L	F	Q	K	V	N	F	L	M	Q	A	A	M	G	F	I	N	I	E	Q	N	R	I	I	K	I	F	S	V	V	S	V	V	F	L	P	P	T	L	V	A	S	S	Y	G	M	N	F	E	F	M	P	E	L	K	W	S	F	G	Y	P	G	A	I	I	F	M	I	L	A	G	L	A	P	Y	L	Y
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		V	E	T	F	R	D	I	V	S	G	L	L	D	V	Y	L	S	S	V	S	N	K	T	N	E	V	M	K	V	L	T	I	I	A	T	I	F	M	P	L	T	F	I	A	G	I	Y	G	M	N	F	.	.	.	.	.	.	.	W	K	W	G	Y	P	V	V	L	A	V	M	G	V	I	A	V	I	M	V	V	Y
Template Known Secondary structure											T																											T	T					T	T	T	T	T	T				.	.	.	.	.	.	.					S	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.								.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	R	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	K	K	K
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions