Job Description P00805 Confidence 94.14% Date Thu Jan 5 10:56:53 GMT 2012 Rank 14 Aligned Residues 131 % Identity 11% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.
Query Sequence		L	P	N	I	T	I	L	A	T	G	G	T	I	A	G	G	G	D	S	A	T	K	S	N	Y	T	V	G	K	V	G	V	E	N	L	V	N	A	V	P	Q	L	K	D	I	A	N	V	K	G	.	.	.	.	.	.	.	.	.	E	Q	V	V	N	I	G	S	Q	D	M	N	D	N	V	W	L	T	L	A	K
Query Conservation																																																				.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	R	F	A	L	T	G	L	A	G	Y	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	H	L	K	A	I	K	E	V	G	G	V	L	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	P	E	A	E	F	F	T	E	P	E	A	F	E	A	Y	L	E
Template Known Secondary structure										T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T									S	S				G	G	G	G	G	T		T	T					S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.																			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	T	D	C	D	K	T	D	G	F	V	I	T	H	G	T	D	T	M	E	E	T	A	Y	F	L	D	L	T	V	K	C	D	K	P	V	V	M	V	G	A	M	R	P	S	T	S	M	S	A	D	G	P	F	N	L	Y	N	A	V	V	T	A	A	D	K	A	S	A	N	R	G	V	L	V	V	M	N
Query Conservation
Alig confidence																														.	.	.										.	.	.							.	.	.	.	.	.	.
Template Conservation																														.	.	.										.	.	.							.	.	.	.	.	.	.
Template Sequence		D	L	R	D	R	G	E	G	V	D	Y	L	S	I	A	S	P	N	H	L	H	Y	P	Q	I	R	M	A	.	.	.	L	R	L	G	A	N	A	L	S	.	.	.	E	K	P	L	V	L	.	.	.	.	.	.	.	W	P	E	E	I	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y	T	V	L	Q
Template Known Secondary structure						T	T				S						S		G	G	G									.	.	.			T	T						.	.	.		S	S	S		S	.	.	.	.	.	.	.																T								G
Template Predicted Secondary structure																														.	.	.										.	.	.							.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.				100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	V	L	D	G	R	D	V	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	V	H	P	S	L	L	A	L	K
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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