Job Description P00805 Confidence 100.00% Date Thu Jan 5 10:56:53 GMT 2012 Rank 10 Aligned Residues 311 % Identity 52% Template c3nxkE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:cytoplasmic l-asparaginase; PDBTitle: crystal structure of probable cytoplasmic l-asparaginase from2 campylobacter jejuni Resolution 2.40 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		P	N	I	T	I	L	A	T	G	G	T	I	A	G	G	G	D	S	A	T	K	S	N	Y	T	V	G	K	V	G	V	E	N	L	V	N	A	V	P	Q	L	K	D	I	A	N	V	K	G	E	Q	V	V	N	I	G	S	Q	D	M	N	D	N	V	W	L	T	L	A	K	K	I	N	T	D	C	.	D	K	T
Query Conservation																																																																														.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	I	A	I	L	G	T	G	G	T	I	A	G	F	.	.	.	.	.	.	.	.	.	.	.	.	A	I	D	I	D	V	L	I	K	A	V	P	Q	I	R	D	L	A	D	I	S	W	E	Q	I	A	N	I	D	S	S	N	X	C	D	E	I	W	L	R	L	A	K	K	I	A	K	L	F	A	E	G	I
Template Known Secondary structure											S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S	T	T																	G	G	G																			T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20													.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	V	I	T	H	G	T	D	T	M	E	E	T	A	Y	F	L	D	L	T	V	K	C	D	K	P	V	V	M	V	G	A	M	R	P	S	T	S	M	S	A	D	G	P	F	N	L	Y	N	A	V	V	T	A	A	D	K	A	S	A	N	R	G	V	L	V	V	M	N	D	T	V	L	D	G	R	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	V	V	I	T	H	G	T	D	T	X	E	E	T	A	Y	F	L	N	L	T	I	K	S	D	K	P	V	V	L	V	G	A	X	R	P	S	T	A	I	S	A	D	G	P	K	N	L	Y	N	A	V	A	L	V	V	N	K	E	A	K	N	K	G	V	X	V	A	I	N	D	K	I	L	S	A	R	G	V
Template Known Secondary structure										S	S	S																S								S	S		T	T	S	T	T		S														S	G	G	G	T	T	S		S					T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	K	T	N	T	T	D	V	A	T	F	K	S	V	N	Y	G	P	L	G	Y	I	H	N	G	K	I	D	Y	Q	R	T	P	A	R	K	H	T	S	D	T	P	F	D	V	S	K	L	N	E	L	P	K	V	G	I	V	Y	N	Y	A	N	A	S	D	L	P	A	.	K	A	L	V	D	A	G	Y	D	G	I
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		V	K	T	H	S	L	N	V	D	A	F	S	S	P	D	F	G	D	L	G	Y	I	V	D	G	K	V	F	F	Y	N	N	V	I	K	A	H	T	K	N	A	P	F	D	V	S	K	L	T	S	L	P	K	V	D	I	L	Y	S	Y	S	N	D	G	S	G	V	A	A	K	A	L	F	E	H	G	T	K	G	I
Template Known Secondary structure						S	S	S	S						T	T	T			S					T	T										S			G	G	G	S					T	T		S												T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	G	V	G	N	G	N	L	Y	K	S	V	F	D	T	L	A	T	A	A	K	T	G	T	A	V	V	R	S	S	R	V	P	T	G	A	T	T	Q	D	A	E	V	D	D	A	K	Y	G	F	V	A	S	G	T	L	N	P	Q	K	A	R	V	L	L	Q	L	A	L	T	Q	T	K	D	P	Q	Q	I
Query Conservation
Alig confidence																																														.	.
Template Conservation																																														.	.
Template Sequence		V	V	A	G	S	G	A	G	S	I	H	K	N	Q	K	D	V	L	K	E	L	L	K	K	G	L	K	V	V	V	S	S	R	V	V	A	G	C	V	A	V	S	D	S	.	.	D	E	K	L	G	F	I	S	A	E	D	L	N	P	Q	K	A	R	V	L	L	X	L	A	L	T	K	T	S	D	P	K	K	I
Template Known Secondary structure						B	T	T	T	B														T	T	T								S	S	S	S	S								.	.					T					T	T														T	T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		342	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	F	N	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	Y	F	L	K	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions