Job Description P00805 Confidence 45.48% Date Thu Jan 5 10:56:53 GMT 2012 Rank 50 Aligned Residues 55 % Identity 13% Template c3h75A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		235	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		K	V	G	I	V	Y	N	Y	A	N	A	S	D	.	.	.	.	L	P	A	K	A	L	V	D	A	G	Y	D	G	I	V	S	A	G	V	G	N	G	N	L	Y	K	S	V	F	D	T	L	A	T	A	A	K	T	G	T	A	V	V	R	S
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																			.	.	.
Template Conservation																																					.	.	.
Template Sequence		G	L	D	L	R	I	L	Y	A	E	R	D	P	Q	N	T	L	Q	Q	A	R	E	L	F	Q	G	R	D	K	P	D	Y	L	X	L	.	.	.	V	N	E	Q	Y	V	A	P	Q	I	L	R	L	S	Q	G	S	G	I	K	L	F	I	V
Template Known Secondary structure		T									T	T															S	S	S			S					.	.	.				S	S										T	T	S
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions