Job Description P00805 Confidence 48.81% Date Thu Jan 5 10:56:53 GMT 2012 Rank 46 Aligned Residues 65 % Identity 22% Template c3bezC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals Resolution 2.76 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		S	K	L	N	E	L	P	K	V	G	I	V	Y	N	Y	A	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	L	P	A	K	A	L	V	D	A	G	Y	D	G	I	V	S	A	G	V	G	N	G	N	L	Y	.	.	.	K	S	V	F	D	T	L	A	T	A	A	K	T	G	T	A	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		T	P	A	D	T	G	D	S	I	G	V	V	F	A	N	G	A	I	X	D	G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V
Template Known Secondary structure							S										S	S			S	S	S			T	T	S																	T	T													B																		T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions