Job Description P00805 Confidence 27.26% Date Thu Jan 5 10:56:53 GMT 2012 Rank 124 Aligned Residues 42 % Identity 24% Template c2v4xA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:capsid protein p27; PDBTitle: crystal structure of jaagsiekte sheep retrovirus capsid n-2 terminal domain Resolution 1.5 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	N	L	V	N	A	V	P	Q	L	K	D	I	A	N	V	K	G	E	Q	V	V	N	I	G	S	Q	D	M	N	D	N	V	W	L	T	L	A	K	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	L	K	I	A	C	S	Q	Y	G	P	T	A	P	F	T	I	A	X	I	E	N	L	G	T	Q	A	L	P	P	N	D	W	K	Q	T	A	R	A	C
Template Known Secondary structure												T		T	T	S												T	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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