Return to main results Retrieve Phyre Job Id

Job DescriptionP00805
Confidence21.31%DateThu Jan 5 10:56:53 GMT 2012
Rank161Aligned Residues16
% Identity19%Templatec2kgfA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:capsid protein p27; PDBTitle: n-terminal domain of capsid protein from the mason-pfizer2 monkey virus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.....
Predicted Secondary structure 




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Query Sequence  SQDMNDNVWLTLAKKI
Query Conservation 

 

   
  

  
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Template Conservation     
 
 

  



 
Template Sequence  DNWLTPTDWNTLVRAV
Template Known Secondary structure  TSB

Template Predicted Secondary structure 




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   50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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