Job Description P00805 Confidence 100.00% Date Thu Jan 5 10:56:53 GMT 2012 Rank 13 Aligned Residues 309 % Identity 25% Template c1wnfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:l-asparaginase; PDBTitle: crystal structure of ph0066 from pyrococcus horikoshii Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	I	L	A	T	G	G	T	I	A	G	G	G	D	S	A	T	K	S	N	Y	T	V	G	K	V	G	V	E	N	L	V	N	A	V	P	Q	L	K	D	I	A	N	V	K	G	E	Q	V	V	N	I	G	S	Q	D	M	N	D	N	V	W	L	T	L	A	K	K	I	N	T	D	C	D	K	T	D	G
Query Conservation
Alig confidence																					.	.	.	.																		.	.	.
Template Conservation																					.	.	.	.																		.	.	.
Template Sequence		R	I	L	I	L	G	M	G	G	T	I	A	S	V	K	G	E	R	G	.	.	.	.	Y	E	S	A	L	S	V	S	K	I	L	K	L	A	G	I	S	.	.	.	A	K	I	E	A	R	D	L	M	N	V	D	S	T	L	I	Q	P	S	D	W	E	R	L	A	K	E	I	E	K	E	V	W	E	Y	D	G
Template Known Secondary structure										S	G	G	G	B			T	T	T	S	.	.	.	.			B										T	T	S			.	.	.													S	S																T	T	T	T	T		S
Template Predicted Secondary structure																					.	.	.	.																		.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		F	V	I	T	H	G	T	D	T	M	E	E	T	A	Y	F	L	D	L	T	V	.	K	C	D	K	P	V	V	M	V	G	A	M	R	P	S	T	S	M	S	A	D	G	P	F	N	L	Y	N	A	V	V	T	A	A	D	K	A	S	A	N	R	G	V	L	V	V	M	N	D	T	V	L	D	G	R	D	V	T
Query Conservation																							.
Alig confidence																							.																																					.	.	.
Template Conservation																																																												.	.	.
Template Sequence		I	V	I	T	H	G	T	D	T	M	A	Y	S	A	S	M	L	S	F	M	L	R	N	P	P	I	P	I	V	L	T	G	S	M	L	P	I	T	E	K	N	S	D	A	P	F	N	L	R	T	A	L	E	F	V	K	L	G	.	.	.	I	R	G	I	Y	I	A	F	N	G	K	V	M	L	G	V	R	A	S
Template Known Secondary structure								S	T	T														S		S	S								S	S		S	S	S	T	T		S													T	S		.	.	.									T	T					G	G	G
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	N	T	T	D	V	A	T	F	K	S	V	N	Y	G	P	L	G	Y	I	H	N	G	K	I	D	Y	Q	R	T	P	A	R	K	H	T	S	D	T	P	F	D	V	S	K	L	N	E	L	P	K	V	G	I	V	Y	N	Y	A	N	A	S	D	L	P	A	K	A	L	V	D	A	G	Y	D	G	I	V	S
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		K	I	R	S	M	G	F	D	A	F	E	S	I	N	Y	P	N	V	A	E	I	K	D	D	K	L	R	I	L	H	I	P	D	F	Y	G	.	.	.	.	D	E	F	F	S	D	I	K	Y	E	P	K	V	L	V	I	K	L	I	P	G	L	S	G	D	I	V	R	E	A	L	R	L	G	Y	K	G	I	I	L
Template Known Secondary structure					S	S	S	S							S	S			S				S	S	S	S												.	.	.	.	S	S																		T	T			T									T	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																																.	.	.
Query SS confidence														.	.																																.	.	.
Query Sequence		A	G	V	G	N	G	N	L	Y	K	S	V	.	.	F	D	T	L	A	T	A	A	K	T	G	T	A	V	V	R	S	S	R	V	P	T	G	A	T	T	Q	D	A	E	V	.	.	.	D	D	A	K	Y	G	F	V	A	S	G	T	L	N	P	Q	K	A	R	V	L	L	Q	L	A	L	T	Q	T	K	D	P
Query Conservation														.	.																																.	.	.
Alig confidence														.	.																																.	.	.
Template Conservation
Template Sequence		E	G	Y	G	V	G	G	I	P	Y	R	G	T	D	L	F	E	V	V	S	S	I	S	K	R	I	P	V	V	L	T	T	Q	A	I	Y	D	G	V	D	L	Q	R	Y	K	V	G	R	I	A	L	E	A	G	V	I	P	A	G	D	M	T	K	E	A	T	I	T	K	L	M	W	I	L	G	H	T	K	N	I
Template Known Secondary structure				S	S	S						S	S	S	S									T	T	T	S							S	S	S	S	S				T	T	S	S									T	T					T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	Q	Q	I	F	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	V	K	Q	L	M	G	K
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions