 |
| Job Description | P46122 | | Confidence | 17.73% | Date | Thu Jan 5 12:04:02 GMT 2012 |
| Rank | 42 | Aligned Residues | 30 |
| % Identity | 7% | Template | c1kzzA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:tnf receptor associated factor 3; |
PDBTitle: downstream regulator tank binds to the cd40 recognition2 site on traf3
|
| Resolution | 3.50 Å |
|
| | |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | E | V | R | Q | M | K | H | S | V | S | T | L | N | Q | E | M | T | Q | L | N | Q | E | T | V | K | I | T | Q | Q |
| Query Conservation | |
|
|
| |
|
|
| | |
| | |
|
|
|
| | | |
| | |
| | | |
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | | | |
| | | | | | |
| | | | | | | | | | | | | |
| Template Sequence | |
S | Q | L | S | R | H | D | Q | M | L | S | V | H | D | I | R | L | A | D | M | D | L | R | F | Q | V | L | E | T | A |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | T |
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
319 | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
