Return to main results Retrieve Phyre Job Id

Job DescriptionP21599
Confidence42.78%DateThu Jan 5 11:38:29 GMT 2012
Rank197Aligned Residues143
% Identity15%Templated1f76a_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190........ .200.........210.... .....220..
Predicted Secondary structure 



















..........


........




Query SS confidence 





































. . . . . . . . . .















. . . . . . . .







Query Sequence  GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFP. . . . . . . . . . RCGEDLNYARRLARDA. . . . . . . . GCDAKIVA
Query Conservation 




      
 




  

  
    

 

 


..........
   

  

  
   ........
    


Alig confidence 





































..........















........







Template Conservation   
 
                         

  


 


             
      
               

 
Template Sequence  GINIGKNKDTPVEQGKDDYLICXEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAXHHKYVPIAV
Template Known Secondary structure 


TTS
GGGTGGG
S


SSSTTGGGGGSTS


Template Predicted Secondary structure 


























Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   223......230.........240.. .......250.........260 .........270.........280.
Predicted Secondary structure 







.....










................



Query SS confidence 



















. . . . .

















. . . . . . . . . . . . . . . .




















Query Sequence  KVERAEAVCSQDAMDDIILA. . . . . SDVVMVARGDLGVEIGDP. . . . . . . . . . . . . . . . ELVGIQKALIRRARQLNRAVI
Query Conservation 


   

    





  .....













   
................ 

  

 

  
   




Alig confidence 







...








.....

















................




















Template Conservation 

 
    ...      
      
 


   

                

 

       
  
  
       



Template Sequence  KIAPDLSE. . . EELIQVADSLVRHNIDGVIATNTTLDRSLVQGXKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPII
Template Known Secondary structure 

S


...TT
S


B


TTSTTSTTTT
SSGGGTTSS
Template Predicted Secondary structure 




...



































Template SS confidence 















































































   217..220.... .....230.........240.........250.........260.........270.........280.........290...
 
   282.......290.........300.........310........
Predicted Secondary structure 









Query SS confidence 




































Query Sequence  TATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLS
Query Conservation   







  

 












 

 





Alig confidence 







............
















Template Conservation    


   ............ 

   
 


  


 
Template Sequence  GVGGIDSV. . . . . . . . . . . . IAAREKIAAGASLVQIY
Template Known Secondary structure  SS

S............T
SS
Template Predicted Secondary structure 




............




Template SS confidence 




































   294.....300. ........310........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions