 |
Job Description | P21599 | Confidence | 99.93% | Date | Thu Jan 5 11:38:29 GMT 2012 |
Rank | 22 | Aligned Residues | 116 |
% Identity | 28% | Template | d1a3xa3 |
SCOP info | Pyruvate kinase C-terminal domain-like
| PK C-terminal domain-like
| Pyruvate kinase, C-terminal domain
|
Resolution | 3.00 |
|
 |
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | |
. | 430 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
H | R | L | D | V | Q | F | D | N | V | E | E | A | I | A | M | S | A | M | Y | A | A | N | H | L | K | G | V | T | A | I | I | T | M | T | E | S | G | R | T | A | L | M | T | S | R | I | S | S | G | L | P | I | F | A | M | S | R | H | E | R | T | L | N | L | T | A | L | Y | R | G | V | T | P | V | H | F | . |
D | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|   |
|   |   |   | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|   |
| . |
|
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
R | N | C | T | P | K | P | T | S | T | T | E | T | V | A | A | S | A | V | A | A | V | F | E | Q | K | A | . |
K | A | I | I | V | L | S | T | S | G | T | T | P | R | L | V | S | K | Y | R | P | N | C | P | I | I | L | V | T | R | C | P | R | A | A | R | F | S | H | L | Y | R | G | V | F | P | F | V | F | E | K | E |
Template Known Secondary structure |   |
T | T | S | S |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | S |
|
|
|  |  |
| S | S | S |  |  |  |  |  |  |  |  | T |
|
| S | S |
|  |  |  |  |  | S |
|  |  |  |  |  |  | G | G | G | S | T | T |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
369 | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
. | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . |
  |
  |   |
431 | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | D | G | V | A | A | A | S | E | A | V | N | L | L | R | D | K | G | Y | L | M | S | G | D | L | V | I | V | T | Q | G | D | V | M | S | T | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
T | D | D | V | E | A | R | I | N | F | G | I | E | K | A | K | E | F | G | I | L | K | K | G | D | T | Y | V | S | I | Q | G | N | T | L | Q | V | S |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S |
|
|
|
|
| B |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|