Job Description P21599 Confidence 60.91% Date Thu Jan 5 11:38:29 GMT 2012 Rank 139 Aligned Residues 144 % Identity 17% Template c3ngjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica Resolution 1.70 Å

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		172	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure													.																																																														.	.	.	.	.	.	.
Query SS confidence													.																																																														.	.	.	.	.	.	.
Query Sequence		E	A	L	T	E	K	D	K	A	D	I	.	K	T	A	A	L	I	G	V	D	Y	L	A	V	S	F	P	R	C	G	E	D	L	N	Y	A	R	R	L	A	R	D	A	G	C	D	A	K	I	V	A	K	V	E	R	A	E	A	V	C	S	Q	D	A	M	D	D	I	I	L	A	S	.	.	.	.	.	.	.
Query Conservation													.																																																														.	.	.	.	.	.	.
Alig confidence													.															.	.	.	.												.	.																		.	.	.											.	.	.	.	.	.	.
Template Conservation																												.	.	.	.												.	.																		.	.	.
Template Sequence		A	D	A	T	E	E	Q	I	R	K	L	C	S	E	A	A	E	Y	K	F	A	S	V	C	V	N	.	.	.	.	P	T	W	V	P	L	C	A	E	L	L	.	.	K	G	T	G	V	K	V	C	T	V	I	G	F	P	L	G	A	.	.	.	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E	Q	G
Template Known Secondary structure		T	T																	T		S						.	.	.	.	G	G	G								T	.	.	T	T	S	S								S	T	T	T			.	.	.	S															T	T
Template Predicted Secondary structure																												.	.	.	.												.	.																		.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
						244	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure		.	.	.	.					.	.	.	.
Query SS confidence		.	.	.	.					.	.	.	.
Query Sequence		.	.	.	.	D	V	V	M	.	.	.	.	V	A	R	G	D	L	G	V	E	I	G	D	P	E	L	V	G	I	Q	K	A	L	I	R	R	A	R	Q	L	N	R	A	V	I	T	A	T	Q	M	M	E	S	M	I	T	N	P	M	P	T	R	A	E	V	M	D	V	A	N	A	V	L	D	G	T	D	A	V
Query Conservation		.	.	.	.					.	.	.	.
Alig confidence		.	.	.	.					.	.	.	.						.	.	.	.	.	.																																			.	.	.	.	.	.							.	.
Template Conservation																			.	.	.	.	.	.																																			.	.	.	.	.	.							.	.
Template Sequence		A	E	E	V	D	M	V	I	N	I	G	M	V	K	A	K	K	.	.	.	.	.	.	Y	D	D	V	E	K	D	V	K	A	V	V	D	A	S	G	K	A	L	T	K	V	I	I	E	C	C	Y	L	T	N	E	E	K	.	.	.	.	.	.	V	E	V	C	K	R	.	.	C	V	A	A	G	A	E	Y	V
Template Known Secondary structure			S													T	T		.	.	.	.	.	.																T	T	S								G	G	G	S						.	.	.	.	.	.							.	.					T		S
Template Predicted Secondary structure																			.	.	.	.	.	.																																			.	.	.	.	.	.							.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.			.	.	.	.	.	150	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	A	E	T	A	A	G	Q	Y	P	S	E	T	V	A	A	M	A	R	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	S	T	G	F	G	T	H	G	A	T	P	E	D	V	K	L	M	K	D	T	V
Template Known Secondary structure						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions