Return to main results Retrieve Phyre Job Id

Job DescriptionP21599
Confidence100.00%DateThu Jan 5 11:38:29 GMT 2012
Rank8Aligned Residues461
% Identity36%Templatec3eoeC_
PDB info PDB header:transferaseChain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50...... ...60.........70.........80..
Predicted Secondary structure 




















.










Query SS confidence 




















































.

























Query Sequence  RLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVRE. IAAKLGRHVAILGDLQGPKIRVSTFK
Query Conservation    





 





   
 
  

 

  
 


 


  
     
  

 .        
 

 

 




 
   
Alig confidence 




















































.

























Template Conservation    





 





   
 
  

 

  
 


 


  
     
  

 
        
 
  

 




 
   
Template Sequence  TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFLK
Template Known Secondary structure  TT

S
SGGG
ST

TTS


TT








BB

BG
Template Predicted Secondary structure 





























Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   83.. ....90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 


.





























Query SS confidence 


.











































































Query Sequence  EGK. VFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKG
Query Conservation     .
 
  
  
 
             
 
    
   
  

 
 



 
 
 
       
   
   
 
 
 

Alig confidence 


.













.




























































Template Conservation      
 
  
  
 
   .         
 
    
   
  

 
 



 
 
 
  
    
   
   
 
   

Template Sequence  DHKPITLQQGATLKIVTD. YNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKN
Template Known Secondary structure  GG


TT
S
.TT

B
SSBS
TT

TT
TTTT
SSSS

SS
B
Template Predicted Secondary structure 






.
























Template SS confidence 















































































   114.....120.........130. ........140.........150.........160.........170.........180.........190..
 
   162.......170.........180.. .......190.........200.........210.........220.........230.........240
Predicted Secondary structure 











.






















Query SS confidence 




















.

























































Query Sequence  INKLGGGLSAEALTEKDKADI. KTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII
Query Conservation 



      
 




  

.  
    

 

 



   

  

  
   
    





   

    





Alig confidence 




















.















































...






Template Conservation 



     

 




  


 

    

 

 



   

   
  
   
    





   

... 





Template Sequence  MNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGL. . . VNFDEIL
Template Known Secondary structure 
TT



S
SS
TTTTTT

TT

STTTTTT

S...T
Template Predicted Secondary structure 






























...
Template SS confidence 















































































   193......200.........210.........220.........230.........240.........250.........260.. .......
 
   241........250.........260.........270.........280.........290.........300.........310.........320
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE
Query Conservation    













   
 

  

 

  
   




 







  

 












 

 





 
Alig confidence 















































































Template Conservation    














  
 

  

 

  
   




 







   
 












 

 





 
Template Sequence  AEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGE
Template Known Secondary structure 
S
TTTS
GGGTT

SSSSGGGGT
SS

T
SS
Template Predicted Secondary structure 



























Template SS confidence 















































































   270.........280.........290.........300.........310.........320.........330.........340.........
 
   321........330.........340.........350.........360.........370.........380.........390.........400
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISS
Query Conservation 

 
 





  
  
   

                      

 

   
    
 



  
 

 

  

  

Alig confidence 

























































.




















Template Conservation 

 
 


  
  
  
   

                      

 


  
    
. 


  
 

 

  

  

Template Sequence  TANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVISTQEAVARAAVETAECVNA. AIILALTETGQTARLIAKYRP
Template Known Secondary structure  T
S
TT




TT.
SSST

Template Predicted Secondary structure 














.







Template SS confidence 















































































   350.........360.........370.........380.........390.........400....... ..410.........420........
 
   401........410.........420.........430.........440.........450.........460.........470.........480
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  GLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE
Query Conservation    



 
     

 
 
  

 
               
       
 
  

 



 
      
 

 
 
  
 
Alig confidence 




























..















.













........









Template Conservation    



 
     

 
 
  

 
    ..   
          
 .
 
  

 



 
........

 


  
 
Template Sequence  MQPILALSASESTIKHLQVIRGVTTMQVP. . QGTDHVIRNAIVVAKE. RLVTEGESIVAVHG. . . . . . . . MNLLKVLTVE
Template Known Secondary structure  SS
S
GGGSTT

..

T.



TT

........



Template Predicted Secondary structure 








..


.








........


Template SS confidence 















































































   432.......440.........450.........460 .........470...... ...480.........490 .........500
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions