Job Description P21599 Confidence 88.94% Date Thu Jan 5 11:38:29 GMT 2012 Rank 74 Aligned Residues 72 % Identity 17% Template c3b0vD_ PDB info PDB header:oxidoreductase/rna Chain: D: PDB Molecule:trna-dihydrouridine synthase; PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna Resolution 3.51 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.														.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		E	K	D	K	A	D	I	K	T	A	A	L	I	G	V	D	Y	L	A	V	S	F	P	R	C	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	Y	A	R	R	L	A	R	D	A	G	C	D	A	K	I	V	A	.	.	K	V	E	R	A	E	A	V	C	S	Q	D	A	M	D	D	I	I
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.													.								.	.						.	.	.	.	.	.
Template Conservation																																																						.															.	.	.	.	.	.
Template Sequence		R	G	L	A	Q	S	V	E	A	X	A	E	A	G	V	K	V	F	V	V	H	A	R	S	A	L	L	A	L	S	T	K	A	N	R	E	I	P	P	L	R	H	D	W	V	H	R	L	K	G	D	F	.	P	Q	L	T	F	V	T	N	G	G	I	R	S	L	.	.	.	.	.	.	E	E	A	L	F	H	L
Template Known Secondary structure														T	T									S		B		T	T	S		T	T	G	G	G	T	S	S															.	T	T	S						S	S			S		.	.	.	.	.	.
Template Predicted Secondary structure																																																						.															.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	D	V	V	M	V	A	R	G	D	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	V	D	G	V	X	L	G	R	A	V	Y	E
Template Known Secondary structure		T	T	S	S					S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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