Job Description P21599 Confidence 57.17% Date Thu Jan 5 11:38:29 GMT 2012 Rank 151 Aligned Residues 132 % Identity 16% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.	.															.
Predicted Secondary structure																	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	D	L	N	Y	A	R	R	L	A	R	D	A	G	.	.	C	D	A	K	I	V	A	K	V	E	R	A	E	A	V	C	S	Q	D	A	M	D	D	I	I	L	A	S	.	.	.	.	.	D	V	V	M	V	A	R	G	D	L	G	V	E	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																.	.	.											.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	I	A	P	D	L	T	S	.	.	.	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K
Template Known Secondary structure														T	S		G	G	G										S					.	.	.														T										B	S				T	T				T	T	T	T	S	S	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		P	E	L	V	G	I	Q	K	A	L	I	R	R	A	R	Q	L	N	.	.	R	A	V	I	T	A	T	Q	M	M	E	S	M	I	T	N	P	M	P	T	R	A	E	V	M	D	V	A	N	A	V	L	D	G	T	D	A	V	M	L	S	A	E	T	A	A	G	Q	Y	P	S	E	T	V	A	A	M	A	R	V
Query Conservation																				.	.
Alig confidence																				.	.												.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	.	.	.	.	.	W	G	P	P	V	V	G	K	V
Template Known Secondary structure																		T	T	T		S						S	S			S	.	.	.	.	.	.	.	.	.	.	.	.											T		S					S						.	.	.	.	.			T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.													.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.						.	.	.	.	.	.	.	.	370
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	G	A	E	K	I	P	S	I	N	V	S	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	E	L	E	A	L	L	K	E	Q	G	F	G	G
Template Known Secondary structure												T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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