 |
Job Description | P21599 | Confidence | 30.90% | Date | Thu Jan 5 11:38:29 GMT 2012 |
Rank | 272 | Aligned Residues | 62 |
% Identity | 11% | Template | c2b7pA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori
|
Resolution | 2.51 Å |
|
 |
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
K | A | D | I | K | T | A | A | L | I | G | V | D | Y | L | A | V | S | F | P | R | C | G | E | D | L | N | Y | A | R | R | L | A | R | D | A | G | C | D | A | K | I | V | A | K | V | E | R | A | E | A | V | C | S | Q | D | A | M | D | D | I | I | L | A | . |
S | D | V | V |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |
|
|
|
|
|
|   |   | . |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
| . | . | . | . |
|
|
|
| . |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
F | E | E | A | K | N | A | M | N | A | G | A | D | I | V | M | C | D | N | L | S | . |
V | L | E | T | K | E | I | A | A | Y | R | D | A | H | Y | P | F | V | L | L | E | A | . |
. |
. |
. |
S | G | N | I | . |
S | L | E | S | I | N | A | Y | A | K | S | G | V | D | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | S |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | S |  |  |  |  | . | . | . | . |  | S | S |
| . |
| T | T | T |  |  |  |  |  | T | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
. | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
|
. | . | . | . | |
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|