Return to main results Retrieve Phyre Job Id

Job DescriptionP21599
Confidence97.00%DateThu Jan 5 11:38:29 GMT 2012
Rank49Aligned Residues92
% Identity12%Templatec1kblA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate phosphate dikinase; PDBTitle: pyruvate phosphate dikinase
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210... ......220.........230.........240.........250...
Predicted Secondary structure 




..........



















........
Query SS confidence 





















. . . . . . . . . .







































. . . . . . . .
Query Sequence  YLAVSFPRCGEDLNYARRLARD. . . . . . . . . . AGCDAKIVAKVERAEAVCSQDAMDDIILASDVVMVARGDL. . . . . . . .
Query Conservation   

 



   

  

  
  .......... 
    





   

    





  










........
Alig confidence 





















..........
















...



















........
Template Conservation   

 


    
    
  
      
           

 







...
     
   

 









 

 
Template Sequence  EIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAA. . . LTADAIAEEAEFFSFGTNDLTQMTFGFS
Template Known Secondary structure 
S

ST





S...TTTT
S
T

Template Predicted Secondary structure 













...



Template SS confidence 















































































   702.......710.........720.........730.........740.........750 .........760.........770........
 
   254.....260.........270...... ...280......
Predicted Secondary structure  .....................





..



Query SS confidence  . . . . . . . . . . . . . . . . . . . . .






















. .









Query Sequence  . . . . . . . . . . . . . . . . . . . . . GVEIGDPELVGIQKALIRRARQL. . NRAVITATQM
Query Conservation  .....................


   
 

  

 

  
   ..




 



Alig confidence  .....................






















..









Template Conservation 
         
         
      


  

   
  
     
  
 



 
Template Sequence  RDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEH
Template Known Secondary structure  TTS
SS
TTTS

TTT
TT

SGG
Template Predicted Secondary structure 






















Template SS confidence 























































   779780.........790.........800.........810.........820.........830....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions