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Job DescriptionP21599
Confidence100.00%DateThu Jan 5 11:38:29 GMT 2012
Rank11Aligned Residues444
% Identity36%Templatec1e0tD_
PDB info PDB header:phosphotransferaseChain: D: PDB Molecule:pyruvate kinase; PDBTitle: r292d mutant of e. coli pyruvate kinase
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  LRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEG
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Template Sequence  MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG
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S

GGG
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BB

BGGG
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   85....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  . KVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGIN
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Template Sequence  NDVSLKAGQTFTFTTD. KSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN
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TT
S
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BBTTBS
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   81........90...... ...100.........110.........120.........130.........140.........150.........
 
   164.....170.........180.........190.........200.........210..... ....220.........230.........240..
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Query Sequence  KLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAG. CDAKIVAKVERAEAVCSQDAMDDIILA
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Template Sequence  LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGL. . . NNFDEILEA
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SS
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   160.........170.........180.........190.........200.........210.........220....... ..230......
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  SDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETA
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Template Sequence  SDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMR. . . . . . . . . PTDAEAGDVANAILDGTDAVMLSGE. .
Template Known Secondary structure  SSS
TT



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   237..240.........250.........260.........270.........280 .........290.........300.....
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  AGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGL
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Template Sequence  . . . . PLEAVSIMATICERTDRVMNS. . . . . . . . . . RLEITEAVCRGAVETAEKLDA. PLIVVATQGGKSARAVRKYFPDA
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TT
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   321........330.........340. ........350.........360.. .......370.........380.....
 
   403......410.........420.........430.........440.........450.........460.........470.........
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Query Sequence  PIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTV
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Template Sequence  TILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVP. SGTTNTASVHVL
Template Known Secondary structure  S
TTSSTT
S


STSS

TT

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   395....400.........410.........420.........430.........440.........450........ .460.........470
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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