Job Description P0AFI9 Confidence 1.80% Date Thu Jan 5 11:26:28 GMT 2012 Rank 74 Aligned Residues 280 % Identity 12% Template d2hyda2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.00

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	Q	W	Y	R	R	R	F	S	D	P	E	A	I	A	L	L	V	I	L	V	A	G	F	G	I	I	F	F	F	S	G	L	L	A	P	L	L	V	A	I	V	L	A	Y	L	L	E	W	P	T	V	R	L	Q	S	I	G	C	S	R	R	W	A	T	S	I	V	L	V	V	F	V	G	I	L	L	L	M
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	K	R	Y	L	Q	F	V	K	P	Y	K	Y	R	I	F	A	T	I	I	V	G	I	I	K	F	G	.	.	.	.	.	.	.	.	.	.	.	I	P	M	L	I	P	L	L	I	K	Y	A	I	D	G	V	I	N	N	H	A	L	T	T	D	E	K	V	H	H	L	T	I	A	I	G	I	A	L	F	I
Template Known Secondary structure											G	G	G													T	T	T		.	.	.	.	.	.	.	.	.	.	.																	T	T		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.												.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		A	F	V	V	L	P	I	A	W	Q	Q	G	I	Y	L	I	R	D	M	P	G	M	L	N	K	.	.	L	S	D	F	A	A	T	L	P	R	R	Y	P	A	L	M	D	A	G	I	I	D	A	M	A	E	N	M	R	S	R	M	L	T	M	G	D	S	V	V	K	I	S	L	A	S	L	V	G	L	L	T	I
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		F	V	I	V	R	P	P	I	E	F	I	R	Q	Y	L	A	Q	W	T	S	N	K	I	L	Y	D	I	R	K	K	L	Y	N	H	L	Q	A	L	S	A	R	F	Y	A	N	N	Q	V	G	Q	V	I	S	R	V	I	N	D	V	E	Q	T	K	D	F	I	L	T	G	L	M	N	I	W	L	D	C	I	T	I
Template Known Secondary structure					T																																		S							T	S																T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		163	.	.	.												.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Query Sequence		A	V	Y	L	.	.	.	.	.	.	.	.	.	.	.	V	L	V	P	L	M	V	F	F	L	L	K	D	K	E	Q	M	L	N	A	V	R	R	V	L	P	R	N	R	G	L	A	G	Q	V	W	K	E	M	N	Q	Q	I	T	N	Y	I	R	G	K	V	L	E	M	I	V	V	.	.	.	.	G	I	A	T
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template Conservation
Template Sequence		I	I	A	L	S	I	M	F	F	L	D	V	K	L	T	L	A	A	L	F	I	F	P	F	Y	I	L	T	V	Y	V	F	F	G	R	L	R	K	L	T	R	E	R	S	Q	A	L	A	E	V	Q	G	F	L	H	E	R	V	Q	G	I	S	V	V	K	S	F	A	I	E	D	N	E	A	K	N	F	D	K	K
Template Known Secondary structure													T	T	T					T	T																																															T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	G	F	L	L	F	G	L	N	Y	S	L	L	L	A	V	L	V	G	F	S	V	L	I	P	Y	I	G	A	F	V	V	T	I	P	V	V	G	V	A	L	F	Q	F	G	A	G	T	E	F	W	S	C	F	A	V	Y	L	I	I	Q	A	L	D	G	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	N	F	L	T	R	A	L	K	H	T	R	W	N	A	Y	S	F	A	A	I	N	T	V	T	D	I	G	P	I	I	V	I	G	V	G	A	Y	L	A	I	S	G	S	I	T	V	G	T	L	A	A	F	V	G	Y	L	E	L	L	F	G	P	L	R	R	L
Template Known Secondary structure																																													T	S												T					T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions