Job Description P0AFI9 Confidence 4.97% Date Thu Jan 5 11:26:28 GMT 2012 Rank 5 Aligned Residues 211 % Identity 8% Template d1pf4a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.80

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	M	Q	W	Y	R	R	R	F	S	D	P	E	A	I	A	L	L	V	I	L	V	A	G	F	G	I	I	F	F	F	S	G	L	L	A	P	L	L	V	A	I	V	L	A	Y	L	L	E	W	P	T	V	R	L	Q	S	I	G	C	S	R	R	W	A	T	S	I	V	L	V	V	F	V	G	I	L	L	L
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	F	K	R	L	W	T	Y	I	R	L	Y	K	A	G	L	V	V	S	T	I	A	L	V	I	N	A	A	.	.	.	.	.	.	.	.	.	.	.	A	D	T	Y	M	I	S	L	L	K	P	L	L	D	E	G	F	G	N	A	E	S	N	F	L	R	I	L	P	F	M	I	L	G	L	M	F	V	R	G
Template Known Secondary structure			S	T	T							T	S		S	S															.	.	.	.	.	.	.	.	.	.	.													T	T	S	S		S					S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																																												.	.	.
Query SS confidence																		.	.																																																												.	.	.
Query Sequence		M	A	F	V	V	L	P	I	A	W	Q	Q	G	I	Y	L	.	.	I	R	D	M	P	G	M	L	N	K	L	S	D	F	A	A	T	L	P	R	R	Y	P	A	L	M	D	A	G	I	I	D	A	M	A	E	N	M	R	S	R	M	L	T	M	G	D	S	V	V	K	I	S	L	A	S	L	V	G	.	.	.
Query Conservation																		.	.																																																												.	.	.
Alig confidence																		.	.																																																												.	.	.
Template Conservation
Template Sequence		L	S	G	F	A	S	S	Y	C	L	S	W	V	S	G	N	V	V	M	Q	M	R	R	R	L	F	N	H	F	M	H	M	P	V	R	F	F	D	Q	E	S	T	G	G	L	L	S	R	I	T	Y	D	S	E	Q	V	A	G	A	T	S	R	A	L	V	S	I	V	R	E	G	A	S	I	I	G	L	L	T	L
Template Known Secondary structure												T	T	T	G	G	G											T	T	T		S	S								T	T											G	G	G																T	T					G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
										159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	L	L	T	I	A	V	Y	L	V	L	V	P	L	M	V	F	F	L	L	K	D	K	E	Q	M	L	N	A	V	R	R	V	L	P	R	N	R	G	L	A	G	Q	V	W	K	E	M	N	Q	Q	I	T	N	Y	I	R	G	K	V	L	E	M	I	V	V	G	I
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	F	W	N	S	W	Q	L	S	L	V	L	I	V	V	A	P	V	V	A	F	A	I	S	F	V	S	K	R	F	R	K	I	S	R	N	M	Q	T	A	M	G	H	R	Q	Q	T	M	K	L	V	S	A	Q	S	I	A	D	P	V	I	Q	M	I	A	S	L	A	L	F	A	V	L	F	L
Template Known Secondary structure		G	S				S		T					G	G	G								T	T	G	G	G	G												T	T												G	G	G	G										T	T							G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions