Job Description P0AFI9 Confidence 3.25% Date Thu Jan 5 11:26:28 GMT 2012 Rank 15 Aligned Residues 176 % Identity 11% Template c3qe7A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uracil permease; PDBTitle: crystal structure of uracil transporter--uraa Resolution 2.78 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		G	L	L	T	I	A	V	Y	L	V	L	V	P	L	M	V	F	F	L	L	K	D	K	E	Q	M	L	N	A	V	R	R	V	L	P	R	N	R	G	L	A	G	Q	V	W	K	E	.	M	N	Q	Q	I	T	N	Y	I	R	G	K	V	L	E	M	I	V	V	G	I	A	T	W	L	G	F	L	L	F	G	L
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		E	W	F	A	I	L	T	I	L	P	A	A	L	V	V	I	A	E	H	V	G	H	L	V	V	T	A	N	I	V	K	K	D	L	L	R	D	P	G	L	H	R	S	M	F	A	N	G	L	S	T	V	I	S	G	F	F	G	S	T	P	N	T	T	Y	G	E	N	I	G	V	M	A	I	T	R	V	Y	S	T
Template Known Secondary structure										T																						T	S		T																								T																		T	B
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	S	L	L	L	A	V	L	V	G	F	S	V	L	I	P	Y	I	G	A	F	V	V	T	I	P	V	V	G	V	A	L	F	Q	F	G	A	G	T	E	F	W	S	C	F	A	V	Y	L	I	I	Q	A	L	D	G	N	L	L	V	P	V	L	F	S	E	A	V	N	L	H	P	L	V	I	I	L	S	V
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.																	.	.
Template Conservation																																		.	.	.	.	.	.	.	.																	.	.
Template Sequence		W	V	I	G	G	A	A	I	F	A	I	L	L	S	C	V	G	K	L	A	A	A	I	Q	M	I	P	L	P	V	M	G	.	.	.	.	.	.	.	.	G	V	S	L	L	L	Y	G	V	I	G	A	S	G	I	R	.	.	V	L	I	E	S	K	V	D	Y	N	K	A	Q	N	L	I	L	T	S	V	I	L
Template Known Secondary structure															T										T	T	S							.	.	.	.	.	.	.	.																	.	.					T	T	S		T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.									.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		317	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		V	I	F	G	G	L	W	G	F	W	.	.	.	.	.	.	.	G	V	F	F	A	I	P	L	A	T	L	I	K	A	V	I	H
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	G	V	S	G	A	K	V	N	I	G	A	A	E	L	K	G	M	A	L	A	T	I	V	G	I	G	L	S	L	I	F	K
Template Known Secondary structure												S	S	S																					T
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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