Job Description P0AFI9 Confidence 8.04% Date Thu Jan 5 11:26:28 GMT 2012 Rank 2 Aligned Residues 282 % Identity 10% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	W	Y	R	R	R	F	S	D	P	E	A	I	A	L	L	V	I	L	V	A	G	F	G	I	I	F	F	F	S	G	L	L	A	P	L	L	V	A	I	V	L	A	Y	L	L	E	W	P	T	V	R	L	Q	S	I	G	C	S	R	R	W	A	T	S	I	V	L	V	V	F	V	G	I	L	L	L	M	A
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		L	P	E	A	R	K	L	L	G	L	A	Y	P	E	R	R	R	L	A	A	A	V	G	F	L	T	M	S	S	V	I	S	M	S	A	P	F	F	L	G	K	I	I	.	.	.	.	.	.	.	.	D	V	I	Y	T	N	P	T	V	D	Y	S	D	N	L	T	R	L	C	L	G	L	S	A	V	F	L	C	G
Template Known Secondary structure													G	G	G																			T	T										.	.	.	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		F	V	V	L	P	I	A	W	Q	Q	G	I	Y	L	I	R	D	M	P	G	M	L	N	K	.	.	L	S	D	F	A	A	T	L	P	R	R	Y	P	A	L	M	D	A	G	I	I	D	A	M	A	E	N	M	R	S	R	M	L	T	M	G	D	S	V	V	K	I	S	L	A	S	L	V	G	L	L	T	I	A
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		A	A	A	N	A	I	R	V	Y	L	M	Q	T	S	G	Q	R	I	V	N	R	L	R	T	S	L	F	S	S	I	L	R	Q	E	V	A	F	F	D	K	T	R	T	G	E	L	I	N	R	L	S	S	D	T	A	L	L	G	R	S	V	T	E	N	L	S	D	G	L	R	A	G	A	Q	A	S	V	G	I	S
Template Known Secondary structure																																		S								S																				T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		164	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																																																												.	.	.	.
Query SS confidence					.	.	.	.	.	.	.																																																												.	.	.	.
Query Sequence		V	Y	L	.	.	.	.	.	.	.	V	L	V	P	L	M	V	F	F	L	L	K	D	K	E	Q	M	L	N	A	V	R	R	V	L	P	R	N	R	G	L	A	G	Q	V	W	K	E	M	N	Q	Q	I	T	N	Y	I	R	G	K	V	L	E	M	I	V	V	G	I	.	.	.	.	A	T	W	L	G	F	L
Query Conservation					.	.	.	.	.	.	.																																																												.	.	.	.
Alig confidence					.	.	.	.	.	.	.																																																												.	.	.	.
Template Conservation
Template Sequence		M	M	F	F	V	S	P	N	L	A	T	F	V	L	S	V	V	P	P	V	S	I	I	A	V	I	Y	G	R	Y	L	R	K	L	T	K	V	T	Q	D	S	L	A	Q	A	T	Q	L	A	E	E	R	I	G	N	V	R	T	V	R	A	F	G	K	E	M	T	E	I	E	K	Y	A	S	K	V	D	H	V	M
Template Known Secondary structure																																																								T							T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	L	N	Y	S	L	L	L	A	V	L	V	G	F	S	V	L	I	P	Y	I	G	A	F	V	V	T	I	P	V	V	G	V	A	L	F	Q	F	G	A	G	T	E	F	W	S	C	F	A	V	Y	L	I	I	Q	A	L	D	G	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	A	R	K	E	A	F	A	R	A	G	F	F	G	A	T	G	L	S	G	N	L	I	V	L	S	V	L	Y	K	G	G	L	L	M	G	S	A	H	M	T	V	G	E	L	S	S	F	L	M	Y	A	F	W	V	G	I	S	I	G	G	L
Template Known Secondary structure																																							T	T	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions