|   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | |
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | T | S | Q | P | F | R | G | N | S | A | G | V | V | F | P | A | D | N | L | S | E | A | Q | M | Q | L | I | A | R | E | L | . |
. |
. |
. |
. |
. |
. |
G | H | S | E | T | A | F | L | L | H | S | . |
. |
D | D | S | D | V | R | I | R | Y | F | T | P | T | V | . |
E | V | P | I | C | G | H | A | T | V | A | A | H |
Query Conservation |   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|   | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|   |   |   | . | . |   |   |   |   |   |   |
|
|   |
|
|
|   |
| . |
|   |   |   |
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |
|
|
| . |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|
Template Sequence |   |
F | S | K | M | H | G | L | G | N | D | . |
F | V | V | V | D | G | V | T | Q | N | V | F | F | T | P | E | T | I | R | R | L | A | N | R | H | C | G | I | G | F | D | Q | L | L | I | V | E | A | P | Y | D | P | E | L | D | F | H | Y | R | I | F | N | A | D | G | S | E | V | S | Q | C | G | N | G | A | R | C | F | A |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T |  |  | . |  |  |  |  |  |
| S | S | S |
|
|
|
|
|  |  |  |  |  |  |  |  |
| T | T | T | S |
|
|
| S |  |  |  |  |  |  |
|
| S | S | T | T | S | S |  |  |  |  |  |  |  | T | T | S |
|  |  | S |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | V | R | A | K | V | L | G | L | G | N | C | T | I | W | Q | T | S | L | A | G | K | H | R | V | T | I | E | K | H | N | D | D | Y | R | I | S | L | E | Q | G | T | P | G | F | E | P | P | L | E | G | E |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |
|   |
|
|   |
|   |
|   |   |   |   |
|
|   |
Template Sequence |   |
R | F | V | T | L | K | G | L | T | N | K | K | D | I | S | V | S | T | Q | K | G | N | M | V | L | T | V | K | D | D | N | . |
. |
. |
Q | I | R | V | N | M | G | E | P | I | W | E | P | A | K | I | P | F |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S |
|
|
| S |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |
| T | T | S | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
| G | G | G | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |