|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | P | Q | V | Y | H | V | D | A | F | T | S | Q | P | F | R | G | N | S | A | G | V | V | F | P | A | D | N | L | S | E | A | Q | M | Q | L | I | A | R | E | L | G | H | S | E | T | A | F | L | L | H | S | D | D | S | . |
D | V | R | I | R | Y | F | T | P | T | V | E | V | P | I | C | G | H | A | T | V | A | A |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |
|
|   |   |   |   |   |   | . |   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|
Template Sequence |   |
M | H | . |
N | Y | V | I | I | D | A | F | A | S | V | P | L | E | G | N | P | V | A | V | F | F | D | A | D | D | L | P | P | A | Q | M | Q | R | I | A | R | E | M | N | L | S | E | S | T | F | V | L | K | P | R | N | G | G | D | A | L | I | R | I | F | T | P | V | N | E | L | P | F | A | G | A | P | L | L | G | T |
Template Known Secondary structure |   |
|
| . |
|  |  |  |  |  |  | T |
| S | S | T | T | S | S |  |  |  |  |  |  |
| S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
|
| S | S | S | S | S |  |  |  |  |  |  |
| S | S |
|  |  | S |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | |
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  | . |  |  |  |  |
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Y | V | R | A | K | V | L | G | L | G | N | C | T | I | W | Q | T | S | L | A | G | K | H | R | V | T | I | E | K | H | N | D | D | Y | R | . |
I | S | L | E | Q | G | T | P | G | F | E | P |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   | . |
|   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
A | I | A | L | G | A | . |
. |
H | T | D | N | H | R | L | Y | L | E | T | Q | M | G | T | I | A | F | E | L | E | R | Q | N | G | S | V | I | A | A | S | M | D | Q | P | I | P | T | W | T | A |
Template Known Secondary structure |   |
 |  |  |  |  | T | . | . | T |
|
|
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | |
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |