Return to main results Retrieve Phyre Job Id

Job DescriptionP37757
Confidence100.00%DateThu Jan 5 11:57:29 GMT 2012
Rank14Aligned Residues125
% Identity26%Templated1u0ka1
SCOP infoDiaminopimelate epimerase-like Diaminopimelate epimerase-like PhzC/PhzF-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50...... ...60.........70.........80.
Predicted Secondary structure 






















.







Query SS confidence 





















































.
























Query Sequence  PQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDS. DVRIRYFTPTVEVPICGHATVAAHY
Query Conservation       

 

     


  

     
    

 

 
    

 

      .   

 


 

   






 
 
Alig confidence 





















































.
























Template Conservation       




     






     
    

 

 
 
 


 

          

 


  

  


 




 
Template Sequence  RRYWQLDVFAERPLTGNGLAVFDDASALDDAAXQAWTRELRQFESIFLLPGDDPRAFRARIFTLEEELPFAGHPLLGAAA
Template Known Secondary structure 

S
SSTT
SS

TT



S
S
TTSS
B

S

T
Template Predicted Secondary structure 


































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82....... 90.........100.........110.........120.......
Predicted Secondary structure 


.













Query SS confidence 







.





































Query Sequence  VRAKVLGL. GNCTIWQTSLAGKHRVTIEKHNDDYRISLEQGTPGFEP
Query Conservation   
      .        
 

   
 
        
      
    
Alig confidence 







.





































Template Conservation   
               
  
 
 
 
            
  
 

 
Template Sequence  LLHHLRGGDNEQHWTLHLASKSVALRSVRAGSGFYAEXDQGRAEFGA
Template Known Secondary structure 

SS

SS
TT







Template Predicted Secondary structure 




















Template SS confidence 














































   83......90.........100.........110.........120.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions