Job Description P37757 Confidence 100.00% Date Thu Jan 5 11:57:29 GMT 2012 Rank 6 Aligned Residues 260 % Identity 31% Template d1s7ja_ SCOP info Diaminopimelate epimerase-like Diaminopimelate epimerase-like PhzC/PhzF-like Resolution 2.30

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	P	Q	V	Y	H	V	D	A	F	T	S	Q	P	F	R	G	N	S	A	G	V	V	F	P	A	D	N	L	S	E	A	Q	M	Q	L	I	A	R	E	L	G	H	S	E	T	A	F	L	L	H	S	D	D	S	D	V	R	I	R	Y	F	T	P	T	V	E	V	P	I	C	G	H	A	T	V	A	A	H
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		M	S	Y	P	Y	Y	I	V	D	A	F	A	E	E	V	F	K	G	N	P	A	A	V	Y	V	L	E	K	W	L	P	E	A	V	M	Q	N	I	A	I	E	N	N	L	S	E	T	A	F	T	V	K	.	E	G	Q	S	Y	A	L	R	W	F	T	P	E	R	E	I	D	L	C	G	H	A	T	L	A	T	A
Template Known Secondary structure												T		S	S	T	T	S	S									S	S																	S								.		T	T									S	S	S			S
Template Predicted Secondary structure																																																						.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	R	A	K	V	L	G	L	G	N	C	T	I	W	Q	T	S	L	A	G	K	H	R	V	T	I	E	K	H	N	D	D	Y	R	I	S	L	E	Q	G	T	P	G	F	E	P	P	L	E	G	E	T	R	A	A	I	I	N	A	L	H	L	T	E	D	D	I	L	P	G	L	P	I	Q	V	A	T	T	G
Query Conservation
Alig confidence																													.	.																.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																													.	.																.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		F	V	L	F	N	Y	Y	S	V	A	E	E	T	L	H	F	T	S	Q	S	G	P	L	A	V	T	K	.	.	K	E	E	Y	Y	Y	L	D	F	P	Y	I	L	P	E	.	.	.	.	.	R	I	P	I	L	P	E	Y	E	A	A	L	G	T	.	.	.	.	.	.	.	.	.	K	I	Y	E	A	Y	L	G
Template Known Secondary structure								S				S	S							T	T								.	.		T	T													.	.	.	.	.													T	S	.	.	.	.	.	.	.	.	.			S					S
Template Predicted Secondary structure																													.	.																.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	K	V	M	I	P	L	K	P	E	V	D	I	D	A	L	S	P	D	L	N	A	L	T	A	I	S	K	K	I	G	C	N	G	F	F	P	F	Q	I	R	P	G	K	N	E	T	D	G	R	M	F	S	P	A	I	G	I	V	E	D	P	V	T	G	N	A	N	G	P	M	G	A	W	L	V	H	H	N
Query Conservation
Alig confidence		.																																							.	.	.	.
Template Conservation		.																																							.	.	.	.
Template Sequence		.	R	D	L	F	F	V	L	K	D	E	E	T	V	A	K	I	T	P	D	F	S	A	L	K	A	L	D	L	G	V	G	V	I	V	T	A	S	G	.	.	.	.	D	S	V	D	F	V	S	R	T	F	F	P	K	L	R	I	N	E	D	P	V	C	G	S	A	H	A	N	L	I	P	Y	W	G	K	R	L
Template Known Secondary structure		.	S	S						S																			S	S		S	S								.	.	.	.	S	S	S	S								G	G	G	T					S			S	T	T
Template Predicted Secondary structure		.																																							.	.	.	.
Template SS confidence
			144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	H	D	G	N	V	L	R	V	K	G	H	Q	G	R	A	L	G	R	D	G	M	I	E	V	T	V	T	I	R	D	N	Q	P	E	K	V	T	I	S	G	T	A	V	I	L	F	H	A	E	W	A	I
Query Conservation
Alig confidence					.	.	.	.	.	.									.	.											.	.	.	.	.
Template Conservation					.	.	.	.	.	.									.	.											.	.	.	.	.
Template Sequence		N	Q	T	.	.	.	.	.	.	T	L	S	A	Y	Q	V	S	.	.	P	R	G	G	F	L	T	C	E	V	.	.	.	.	.	K	E	N	R	V	I	I	G	G	T	A	K	L	F	A	K	G	E	A	Y	L
Template Known Secondary structure		T		S	.	.	.	.	.	.								S	.	.	S	S									.	.	.	.	.		T	T
Template Predicted Secondary structure					.	.	.	.	.	.									.	.											.	.	.	.	.
Template SS confidence
		219	220	.							.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions