Return to main results Retrieve Phyre Job Id

Job DescriptionP37757
Confidence100.00%DateThu Jan 5 11:57:29 GMT 2012
Rank6Aligned Residues260
% Identity31%Templated1s7ja_
SCOP infoDiaminopimelate epimerase-like Diaminopimelate epimerase-like PhzC/PhzF-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRIRYFTPTVEVPICGHATVAAH
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Template Sequence  MSYPYYIVDAFAEEVFKGNPAAVYVLEKWLPEAVMQNIAIENNLSETAFTVK. EGQSYALRWFTPEREIDLCGHATLATA
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   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  YVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQGTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTG
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Template Sequence  FVLFNYYSVAEETLHFTSQSGPLAVTK. . KEEYYYLDFPYILPE. . . . . RIPILPEYEAALGT. . . . . . . . . KIYEAYLG
Template Known Secondary structure  S


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   80.........90.........100...... ...110.........120. ........130..... ....140...
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  HSKVMIPLKPEVDIDALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHN
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Template Sequence  . RDLFFVLKDEETVAKITPDFSALKALDLGVGVIVTASG. . . . DSVDFVSRTFFPKLRINEDPVCGSAHANLIPYWGKRL
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   144.....150.........160.........170.........180. ........190.........200.........210........
 
   241........250.........260.........270.........280.........290.....
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Query Sequence  VLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAI
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Template Sequence  NQT. . . . . . TLSAYQVS. . PRGGFLTCEV. . . . . KENRVIIGGTAKLFAKGEAYL
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   219220. ........ 230......... 240.........250.........260
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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