Job Description P37757 Confidence 100.00% Date Thu Jan 5 11:57:29 GMT 2012 Rank 13 Aligned Residues 244 % Identity 16% Template c3fveA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase mycobacterium2 tuberculosis dapf Resolution 2.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.																	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																					.	.	.													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		F	T	S	Q	P	F	R	G	N	S	A	G	V	V	F	P	A	D	N	.	.	.	L	S	E	A	Q	M	Q	L	I	A	R	E	.	.	.	L	G	H	S	E	T	A	F	L	L	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	S	D	V	R	I	R	Y	F	T	P	T	V	.
Query Conservation																					.	.	.													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																					.	.	.													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		F	A	K	G	H	G	T	Q	N	D	F	V	L	L	P	D	V	D	A	E	L	V	L	T	A	A	R	V	A	A	L	C	D	R	R	K	G	L	G	A	D	G	V	L	R	V	T	T	A	G	A	A	Q	A	V	G	V	L	D	S	L	P	E	G	V	R	V	T	D	W	Y	M	D	Y	R	N	A	D	G	S
Template Known Secondary structure							S	S	S									T	T			S													T	T	T	S				S														T	T	S		S	S			T	T			T	T	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		E	V	P	I	C	G	H	A	T	V	A	A	H	Y	V	R	A	K	V	L	G	L	G	N	C	T	I	W	Q	T	S	L	A	G	K	H	R	V	T	I	E	K	H	N	.	D	D	Y	R	I	S	L	E	Q	G	T	P	G	F	E	P	P	L	E	G	E	T	R	A	A	I	I	N	A	L	H	L	T	E	D
Query Conservation																																														.
Alig confidence																																														.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	Q	M	C	G	N	G	V	R	V	F	A	H	Y	L	R	A	S	G	L	E	V	R	D	E	F	V	V	G	S	L	A	G	P	R	P	V	T	C	H	H	V	E	A	A	Y	A	D	V	S	V	D	M	G	K	A	N	R	L	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B			T	T		T	T											T	T	S				S							T	T												S	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																									.	.														.
Query SS confidence																									.	.														.
Query Sequence		D	I	L	P	G	L	P	I	Q	V	A	T	T	G	H	S	K	V	M	I	P	L	K	.	.	P	E	V	D	I	D	A	L	S	P	D	L	N	.	A	L	T	A	I	S	K	K	I	G	C	N	G	F	F	P	F	Q	I	R	P	G	K	N	E	T	D	G	R	M	F	S	P	A	I	G	I	V	E	D	P
Query Conservation																									.	.														.
Alig confidence		.	.																						.	.														.																		.	.	.	.																.	.
Template Conservation		.	.																																																							.	.	.	.																.	.
Template Sequence		.	.	E	A	V	F	H	G	L	A	V	D	V	G	N	P	H	L	A	C	V	D	S	Q	L	T	V	D	G	L	A	A	L	D	V	G	V	S	F	D	G	A	Q	F	P	D	G	V	N	V	E	V	L	T	A	P	.	.	.	.	V	D	G	A	V	W	M	R	V	H	E	R	G	V	G	.	.	E	T	R
Template Known Secondary structure		.	.		B									S	S	S								T	T			T	T	T	T		S							B		T	T	T		T	T											.	.	.	.	B	T	T								B	T	T	T	B	.	.	S		S
Template Predicted Secondary structure		.	.																																																							.	.	.	.																.	.
Template SS confidence
				146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	G	N	A	N	G	P	M	G	A	W	L	V	H	H	N	V	L	P	H	D	G	N	V	L	R	V	K	G	H	Q	G	R	A	L	G	R	D	G	M	I	E	V	T	V	T	I	R	D	N	Q	P	E	K	V	T	I	S	G	T	A	V	I	L	F	H	A	E	W
Query Conservation
Alig confidence																								.	.	.	.							.	.	.	.	.										.	.	.	.	.
Template Conservation																								.	.	.	.							.	.	.	.	.										.	.	.	.	.
Template Sequence		S	C	G	T	G	T	V	A	A	A	V	A	A	L	A	A	V	G	S	P	T	G	.	.	.	.	T	L	T	V	H	V	.	.	.	.	.	P	G	G	E	V	V	V	T	V	.	.	.	.	.	T	D	A	T	S	F	L	R	G	P	S	V	L	V	A	R	G	D	L
Template Known Secondary structure																		T	T		S	S		.	.	.	.							.	.	.	.	.	T	T								.	.	.	.	.		S	S
Template Predicted Secondary structure																								.	.	.	.							.	.	.	.	.										.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.						.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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