Job Description P37757 Confidence 100.00% Date Thu Jan 5 11:57:29 GMT 2012 Rank 9 Aligned Residues 260 % Identity 15% Template c2gkjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap Resolution 1.70 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.	.	.	.	.	.	.													.	.															.
Query SS confidence																																	.	.	.	.	.	.	.													.	.															.
Query Sequence		F	T	S	Q	P	F	R	G	N	S	A	G	V	V	F	P	A	D	N	L	S	E	A	Q	M	Q	L	I	A	R	E	.	.	.	.	.	.	.	L	G	H	S	E	T	A	F	L	L	H	S	.	.	D	D	S	D	V	R	I	R	Y	F	T	P	T	V	.	E	V	P	I	C	G	H	A	T	V	A	A	H
Query Conservation																																	.	.	.	.	.	.	.													.	.															.
Alig confidence													.																				.	.	.	.	.	.	.													.	.															.
Template Conservation													.
Template Sequence		F	S	K	M	H	G	L	G	N	D	F	.	V	V	V	D	G	V	T	Q	N	V	F	F	T	P	E	T	I	R	R	L	A	N	R	H	C	G	I	G	F	D	Q	L	L	I	V	E	A	P	Y	D	P	E	L	D	F	H	Y	R	I	F	N	A	D	G	S	E	V	S	Q	C	G	N	G	A	R	C	F	A
Template Known Secondary structure								T	T				.						S	S	S															T	T	T	S				S									S	S	T	T	S	S								T	T	S				S
Template Predicted Secondary structure													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	R	A	K	V	L	G	L	G	N	C	T	I	W	Q	T	S	L	A	G	K	H	R	V	T	I	E	K	H	N	D	D	Y	R	I	S	L	E	Q	G	T	P	G	F	E	P	P	L	E	G	E	T	R	A	A	I	I	N	A	L	H	L	T	E	D	D	I	L	P	G	L	P	I	Q	V	A	T	T	G
Query Conservation
Alig confidence																																	.	.	.																														.	.
Template Conservation																																	.	.	.																														.	.
Template Sequence		R	F	V	T	L	K	G	L	T	N	K	K	D	I	S	V	S	T	Q	K	G	N	M	V	L	T	V	K	D	D	N	.	.	.	Q	I	R	V	N	M	G	E	P	I	W	E	P	A	K	I	P	F	T	A	N	K	F	E	K	N	Y	I	L	.	.	R	T	D	I	Q	T	V	L	C	G	A	V	S	M	G
Template Known Secondary structure							T	T	S				S							S	S									T	T	S	.	.	.										B			G	G	G	T	T				S	S			S	S				.	.			S	S										S	S
Template Predicted Secondary structure																																	.	.	.																														.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		H	S	K	V	M	I	P	L	K	P	E	V	D	.	.	I	D	A	L	S	P	D	L	N	A	L	T	A	I	S	K	K	I	G	C	N	G	F	F	P	F	Q	I	R	P	G	K	N	E	T	D	G	R	M	F	S	P	A	I	G	I	V	E	D	P	V	T	G	N	A	N	G	P	M	G	A	W	L	V	H
Query Conservation															.	.
Alig confidence															.	.																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		N	P	H	C	V	V	Q	V	D	D	I	Q	T	A	N	V	E	Q	L	G	P	L	L	E	S	H	E	R	F	P	E	R	V	N	A	G	F	M	Q	I	I	.	.	.	.	N	K	E	H	I	K	L	R	V	Y	E	R	G	A	G	E	T	Q	A	C	G	S	G	A	C	A	A	V	A	V	G	I	M	Q	G
Template Known Secondary structure		S								S		T	T	T	S											T		T	T		T	T											.	.	.	.		T	T									T	T	T				S																T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	V	L	P	H	D	G	N	V	L	R	V	K	G	H	Q	G	R	A	L	G	R	D	G	M	I	E	V	T	V	T	I	R	D	N	Q	P	E	K	V	T	I	S	G	T	A	V	I	L	F	H	A	E	W	A	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.						.	.	.	.	.															.	.	.
Template Conservation							.	.	.	.	.	.	.						.	.	.	.	.															.	.	.
Template Sequence		L	L	N	N	N	.	.	.	.	.	.	.	V	Q	V	D	L	.	.	.	.	.	P	G	G	S	L	M	I	E	W	N	G	V	G	H	.	.	.	P	L	Y	M	T	G	E	A	T	H	I	Y	D	G	F	I	T	L
Template Known Secondary structure		S	S		S		.	.	.	.	.	.	.						.	.	.	.	.	T	T										T	T	S	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.						.	.	.	.	.															.	.	.
Template SS confidence
		233	.	.	.	.								.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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