Job Description P37757 Confidence 100.00% Date Thu Jan 5 11:57:29 GMT 2012 Rank 11 Aligned Residues 286 % Identity 13% Template c1w62B_ PDB info PDB header:racemase Chain: B: PDB Molecule:b-cell mitogen; PDBTitle: proline racemase in complex with one molecule of pyrrole-2-2 carboxylic acid (hemi form) Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.									.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																								.	.	.	.	.														.	.	.	.	.	.								.	.	.	.	.	.	.	.							.	.
Query SS confidence																								.	.	.	.	.														.	.	.	.	.	.								.	.	.	.	.	.	.	.							.	.
Query Sequence		V	Y	H	V	D	A	F	T	S	Q	P	F	R	G	N	S	A	G	V	V	F	P	.	.	.	.	.	A	D	N	L	S	E	A	Q	M	Q	L	I	A	.	.	.	.	.	.	R	E	L	G	H	S	E	.	.	.	.	.	.	.	.	T	A	F	L	L	H	.	.	S	D	D	S	D	V	R	I	R	Y	F
Query Conservation																								.	.	.	.	.														.	.	.	.	.	.								.	.	.	.	.	.	.	.							.	.
Alig confidence										.	.	.	.											.	.	.	.	.														.	.	.	.	.	.								.	.	.	.	.	.	.	.							.	.
Template Conservation										.	.	.	.
Template Sequence		F	T	C	I	D	M	H	T	.	.	.	.	E	G	E	A	A	R	I	V	T	S	G	L	P	H	I	P	G	S	N	M	A	E	K	K	A	Y	L	Q	E	N	M	D	Y	L	R	R	G	I	M	L	E	P	R	G	H	D	D	M	F	G	A	F	L	F	D	P	I	E	E	G	A	D	L	G	I	V	F	M
Template Known Secondary structure										.	.	.	.	T	T																S	S																					S	B	T	T	S		T	T											S	T	T		S
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.																				.	.	.	.
Query SS confidence																																.	.	.	.	.	.																				.	.	.	.
Query Sequence		T	P	T	V	E	V	P	I	C	G	H	A	T	V	A	A	H	Y	V	R	A	K	V	L	G	L	G	N	C	T	.	.	.	.	.	.	I	W	Q	T	S	L	A	G	K	H	R	V	T	I	E	K	H	N	D	.	.	.	.	D	Y	R	I	S	L	E	Q	G	T	P	G	F	E	P	P	L	E	G	E	T
Query Conservation																																.	.	.	.	.	.																				.	.	.	.
Alig confidence																																.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		D	T	G	G	Y	L	N	M	C	G	H	N	S	I	A	A	V	T	A	A	V	E	T	G	I	V	S	V	P	A	K	A	T	N	V	P	V	V	L	D	T	P	A	G	L	V	R	G	T	A	H	L	Q	S	G	T	E	S	E	V	S	N	A	S	I	I	N	V	P	S	F	L	Y	Q	Q	D	V	V	V	V
Template Known Secondary structure			S	S		S			S	T	T													T	T	S	S				T	T		S									T	T											T	T		S	S												B
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.
Query Sequence		R	A	A	I	I	N	A	L	H	L	T	E	D	D	I	L	P	G	L	P	I	Q	V	A	T	T	G	H	S	K	V	M	I	P	L	K	P	E	V	D	I	D	A	L	S	P	D	L	N	A	.	.	.	.	.	.	.	.	.	L	T	A	I	S	K	K	I	G	C	N	G	F	F	P	F	Q	I	R	P	G
Query Conservation																																																				.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		L	P	K	P	Y	G	E	V	R	V	D	I	A	F	G	.	.	G	N	F	F	A	I	V	P	A	E	Q	L	G	I	D	I	S	V	Q	N	L	S	R	L	Q	E	A	G	E	L	L	R	T	E	I	N	R	S	V	K	V	Q	H	P	Q	L	P	H	I	N	T	V	D	C	V	E	I	Y	G	P	P	T	N
Template Known Secondary structure				T	T	T										S	.	.	S	S											T					S	T	T																								S	S		T	T			S											S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.
Query Sequence		K	N	E	T	D	G	R	M	F	S	P	A	I	G	I	V	E	D	P	V	T	G	N	A	N	G	P	M	G	A	W	L	V	H	H	N	V	L	P	H	D	.	.	.	.	.	.	.	.	.	G	N	V	L	R	V	K	G	H	Q	G	R	A	L	G	R	D	G	M	I	E	V	T	V	T	I	R	D	N	Q
Query Conservation																																											.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	N	Y	K	N	V	V	I	F	G	N	R	Q	A	D	R	S	P	C	G	T	G	T	S	A	K	M	A	T	L	Y	A	K	G	Q	L	R	I	G	E	T	F	V	Y	E	S	I	L	G	S	L	F	Q	G	R	V	L	G	E	E	R	I	P	G	V	K	V	P	V	T	K	D	A	E	E	G	M	L
Template Known Secondary structure		T	T	S	S								T	T	T				S	S																T	T		S		T	T								T	T	S															T				T	T	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	K	V	T	I	S	G	T	A	V	I	L	F	H	A	E	W	A	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	T	A	E	I	T	G	K	A	F	I	M	G	F	N	T	M	L	F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions