Job Description P16433 Confidence 99.89% Date Thu Jan 5 11:35:09 GMT 2012 Rank 3 Aligned Residues 143 % Identity 22% Template d1e3da_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 1.8

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		A	Y	V	Y	R	V	D	C	G	G	C	N	G	C	E	I	E	I	F	A	T	L	S	P	L	F	D	A	E	R	F	G	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	P	S	P	R	H	A	D	I	L	L	F	T	G	A	V	T	R	A	M	R	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		P	S	V	V	Y	L	H	A	A	E	C	T	G	C	S	E	A	L	L	R	T	Y	Q	P	F	I	D	T	L	I	L	D	T	I	S	L	D	Y	H	E	T	I	M	A	A	A	G	E	A	A	E	E	A	L	Q	A	A	V	N	G	P	D	G	F	I	C	L	V	E	G	A	I	P	T	G	M	D	N	K	Y
Template Known Secondary structure									S	B			S								T		B	T	T	B							T	T							T	T	T		S															T		S	S								S	B				T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
								94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.																														.	.																.	.	.	.
Query SS confidence		.	.	.	.	.	.																														.	.																.	.	.	.
Query Sequence		.	.	.	.	.	.	S	P	A	L	R	A	W	Q	S	A	P	D	P	K	I	C	I	S	Y	G	A	C	G	N	S	G	G	I	F	.	.	H	D	L	Y	C	V	W	G	G	T	D	K	I	V	P	.	.	.	.	V	D	V	Y	I	P	G	C	P	P	T	P	A	A	T	L	Y	G	F	A	M	A	L	G
Query Conservation		.	.	.	.	.	.																														.	.																.	.	.	.
Alig confidence		.	.	.	.	.	.																														.	.																.	.	.	.																								.
Template Conservation																																																																																	.
Template Sequence		G	Y	I	A	G	H	T	M	Y	D	I	C	K	N	I	L	P	K	A	K	A	V	V	S	I	G	T	C	A	C	Y	G	G	I	Q	A	A	K	P	N	P	T	A	A	K	G	I	N	D	C	Y	A	D	L	G	V	K	A	I	N	V	P	G	C	P	P	N	P	L	N	M	V	G	T	L	V	A	F	L	.
Template Known Secondary structure					T	T											G	G	G	S	S						S							G	G	G	G	S	T	T		T	T										G	G	G	T								S	S	S															.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	Q	K	I	H	A	R	G	P	G	E	L	D	E	Q	P	A	E	I	L	H	G	D	M
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	G	Q	K	I	E	L	D	E	V	G	R	P	V	M	F	F	G	Q	S
Template Known Secondary structure		.	.	.	.	.	.	T	T					B		T	T	S		B					S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions