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Job DescriptionP16433
Confidence99.88%DateThu Jan 5 11:35:09 GMT 2012
Rank6Aligned Residues124
% Identity24%Templatec3rgwS_
PDB info PDB header:oxidoreductase/oxidoreductaseChain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.... .....70.........80.........90...
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Query Sequence  AYVYRVDCGGCNGCEIEIFATLSPLFD. . . . . . . . . . . . . . . . . . . . . . AERFGIKVVPSPRHADILLFTGAVTRAMR. .
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Template Sequence  TPVLWLHGLECTCCSESFIRSAHPLAKDVVLSMISLDYDDTLMAAAGHQAEAILEEIMTKYKGNYILAVEGNPPLNQDGM
Template Known Secondary structure 
B

STT
BTTBTTTT
S

TTT
SSB
B
SGGGT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   94.....100.........110.........120.. .......130......... 140.........150.........160.
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Query Sequence  . . . . . . . SPALRAWQSAPDPKICISYGACGNSGGIF. . HDLYCVWGGTDKIVPVD. . VYIPGCPPTPAATLYGFAMALG
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Template Sequence  SCIIGGRPFIEQLKYVAKDAKAIISWGSCASWGCVQAAKPNPTQATPVHKVITDKPIIKVPGCPPIAEVMTGVITYMLT
Template Known Secondary structure  TSTTTT
ST
TGGGSTT
TT
B

GGGT

SS

SSS

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   87..90.........100.........110.........120.........130.........140.........150.........160.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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