Job Description P16433 Confidence 99.86% Date Thu Jan 5 11:35:09 GMT 2012 Rank 9 Aligned Residues 126 % Identity 22% Template c3myrE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state Resolution 2.10 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	A	Y	V	Y	R	V	D	C	G	G	C	N	G	C	E	I	E	I	F	A	T	L	S	P	L	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	F	G	I	K	V	V	P	S	P	R	H	A	D	I	L	L	F	T	G	A	V	T	R	A	M	R
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	P	S	V	I	W	L	S	F	Q	E	C	T	G	C	T	E	S	L	T	R	A	H	A	P	T	L	E	D	L	I	L	D	F	I	S	L	D	Y	H	H	T	L	Q	A	A	S	G	E	A	A	E	A	A	R	L	Q	A	M	D	E	N	R	G	Q	Y	L	V	I	V	D	G	S	I	P	G	P	D	A
Template Known Secondary structure			S									B			S											S	S									T							T	T	T		S	S																T	T	T	T							S	B				T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
												94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																														.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																														.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	P	A	L	R	A	W	Q	S	A	P	D	P	K	I	C	I	S	Y	G	A	C	G	N	S	G	G	I	F	.	.	H	D	L	Y	C	V	W	G	G	T	D	K	I	V	P	V	D	.	.	V	Y	I	P	G	C	P	P	T	P	A	A	T	L	Y	G	F	A	M	A
Query Conservation		.	.	.	.	.	.	.	.	.	.																														.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																														.	.																		.	.
Template Conservation
Template Sequence		N	P	G	F	S	T	V	A	G	H	S	N	Y	S	I	L	M	E	T	V	E	H	A	A	A	V	I	A	V	G	T	C	A	A	F	G	G	L	P	Q	A	R	P	N	P	T	G	A	M	S	V	M	D	L	V	R	D	K	P	V	I	N	V	P	G	C	P	P	I	P	M	V	I	T	G	V	I	A	H	Y
Template Known Secondary structure			G	G	G	S			T	T												T	T		S													T	G	G	G	S	T	T		T	T											S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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